Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
CISHQ9NSE2 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CISHQ9NSE2 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.14□□□□□ -1.43
CISHQ9NSE2 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CISHQ9NSE2 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CISHQ9NSE2 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CISHQ9NSE2 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.14□□□□□ -1.43
CISHQ9NSE2 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CISHQ9NSE2 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CISHQ9NSE2 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.13□□□□□ -1.43
CISHQ9NSE2 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.13□□□□□ -1.43
CISHQ9NSE2 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CISHQ9NSE2 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CISHQ9NSE2 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CISHQ9NSE2 MIR375-201ENST00000362103 64 ntBASIC6.13□□□□□ -1.43
CISHQ9NSE2 MIR130A-201ENST00000385274 89 ntBASIC6.13□□□□□ -1.43
CISHQ9NSE2 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CISHQ9NSE2 RPS3AP2-201ENST00000407190 754 ntBASIC6.13□□□□□ -1.43
CISHQ9NSE2 RN7SKP279-201ENST00000411383 298 ntBASIC6.13□□□□□ -1.43
CISHQ9NSE2 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC6.13□□□□□ -1.43
CISHQ9NSE2 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.13□□□□□ -1.43
CISHQ9NSE2 AC127526.2-201ENST00000426436 775 ntBASIC6.13□□□□□ -1.43
CISHQ9NSE2 AC002069.1-201ENST00000429649 1159 ntBASIC6.13□□□□□ -1.43
CISHQ9NSE2 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.13□□□□□ -1.43
CISHQ9NSE2 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.13□□□□□ -1.43
CISHQ9NSE2 HMGB3P24-201ENST00000433260 622 ntBASIC6.13□□□□□ -1.43
CISHQ9NSE2 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.13□□□□□ -1.43
CISHQ9NSE2 PCNPP2-201ENST00000441651 455 ntBASIC6.13□□□□□ -1.43
CISHQ9NSE2 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.13□□□□□ -1.43
CISHQ9NSE2 RPS23P6-201ENST00000466136 431 ntBASIC6.13□□□□□ -1.43
CISHQ9NSE2 PDCL3P4-201ENST00000489621 720 ntBASIC6.13□□□□□ -1.43
CISHQ9NSE2 AC073610.1-201ENST00000489971 396 ntBASIC6.13□□□□□ -1.43
CISHQ9NSE2 ST13P12-201ENST00000508958 1094 ntBASIC6.13□□□□□ -1.43
CISHQ9NSE2 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.13□□□□□ -1.43
CISHQ9NSE2 AP004609.2-201ENST00000532177 190 ntBASIC6.13□□□□□ -1.43
CISHQ9NSE2 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.13□□□□□ -1.43
CISHQ9NSE2 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.13□□□□□ -1.43
CISHQ9NSE2 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.13□□□□□ -1.43
CISHQ9NSE2 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.13□□□□□ -1.43
CISHQ9NSE2 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.13□□□□□ -1.43
CISHQ9NSE2 AC060780.2-201ENST00000589047 198 ntBASIC6.13□□□□□ -1.43
CISHQ9NSE2 HIRAP1-201ENST00000605318 787 ntBASIC6.13□□□□□ -1.43
CISHQ9NSE2 RN7SL544P-201ENST00000617232 284 ntBASIC6.13□□□□□ -1.43
CISHQ9NSE2 AL035661.1-201ENST00000620459 1144 ntBASIC6.13□□□□□ -1.43
CISHQ9NSE2 RN7SL763P-201ENST00000620922 284 ntBASIC6.13□□□□□ -1.43
CISHQ9NSE2 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CISHQ9NSE2 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.13□□□□□ -1.43
CISHQ9NSE2 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
CISHQ9NSE2 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CISHQ9NSE2 AC106872.5-201ENST00000508856 1416 ntBASIC6.13□□□□□ -1.43
CISHQ9NSE2 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.13□□□□□ -1.43
CISHQ9NSE2 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CISHQ9NSE2 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.13□□□□□ -1.43
CISHQ9NSE2 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CISHQ9NSE2 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.13□□□□□ -1.43
CISHQ9NSE2 AC007842.1-201ENST00000597336 2039 ntBASIC6.13□□□□□ -1.43
CISHQ9NSE2 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CISHQ9NSE2 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CISHQ9NSE2 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.12□□□□□ -1.43
CISHQ9NSE2 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CISHQ9NSE2 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.12□□□□□ -1.43
CISHQ9NSE2 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CISHQ9NSE2 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CISHQ9NSE2 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CISHQ9NSE2 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CISHQ9NSE2 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
CISHQ9NSE2 RPL11P3-201ENST00000395256 523 ntBASIC6.12□□□□□ -1.43
CISHQ9NSE2 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.12□□□□□ -1.43
CISHQ9NSE2 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.12□□□□□ -1.43
CISHQ9NSE2 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CISHQ9NSE2 AL022331.1-201ENST00000429025 477 ntBASIC6.12□□□□□ -1.43
CISHQ9NSE2 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.12□□□□□ -1.43
CISHQ9NSE2 AL445665.1-202ENST00000452436 324 ntBASIC6.12□□□□□ -1.43
CISHQ9NSE2 GTF2IP4-201ENST00000453092 2054 ntBASIC6.12□□□□□ -1.43
CISHQ9NSE2 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.12□□□□□ -1.43
CISHQ9NSE2 snoU13.29-201ENST00000459370 104 ntBASIC6.12□□□□□ -1.43
CISHQ9NSE2 RPS23P2-201ENST00000463671 415 ntBASIC6.12□□□□□ -1.43
CISHQ9NSE2 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CISHQ9NSE2 AC093719.1-201ENST00000480427 441 ntBASIC6.12□□□□□ -1.43
CISHQ9NSE2 AC022215.1-201ENST00000481770 362 ntBASIC6.12□□□□□ -1.43
CISHQ9NSE2 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CISHQ9NSE2 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC6.12□□□□□ -1.43
CISHQ9NSE2 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CISHQ9NSE2 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.12□□□□□ -1.43
CISHQ9NSE2 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CISHQ9NSE2 AC079600.1-201ENST00000550326 297 ntBASIC6.12□□□□□ -1.43
CISHQ9NSE2 DPPA2P4-201ENST00000563717 878 ntBASIC6.12□□□□□ -1.43
CISHQ9NSE2 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.12□□□□□ -1.43
CISHQ9NSE2 AC063977.5-201ENST00000601044 974 ntBASIC6.12□□□□□ -1.43
CISHQ9NSE2 NANOGP3-201ENST00000605855 286 ntBASIC6.12□□□□□ -1.43
CISHQ9NSE2 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.12□□□□□ -1.43
CISHQ9NSE2 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.12□□□□□ -1.43
CISHQ9NSE2 AL137141.1-201ENST00000624622 4836 ntBASIC6.12□□□□□ -1.43
CISHQ9NSE2 AC069542.2-201ENST00000624816 216 ntBASIC6.12□□□□□ -1.43
CISHQ9NSE2 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.12□□□□□ -1.43
CISHQ9NSE2 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CISHQ9NSE2 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CISHQ9NSE2 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.12□□□□□ -1.43
CISHQ9NSE2 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CISHQ9NSE2 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms