Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 TRIM60P16-201ENST00000444048 694 ntBASIC6.12□□□□□ -1.43
PCDH9Q9HC56 FRG2FP-204ENST00000453982 852 ntBASIC6.12□□□□□ -1.43
PCDH9Q9HC56 CTSLP6-201ENST00000458273 1002 ntBASIC6.12□□□□□ -1.43
PCDH9Q9HC56 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 RPL38P3-201ENST00000484463 213 ntBASIC6.12□□□□□ -1.43
PCDH9Q9HC56 AC083795.1-201ENST00000491760 320 ntBASIC6.12□□□□□ -1.43
PCDH9Q9HC56 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 AC147055.1-201ENST00000509261 750 ntBASIC6.12□□□□□ -1.43
PCDH9Q9HC56 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 AC011853.1-201ENST00000518911 454 ntBASIC6.12□□□□□ -1.43
PCDH9Q9HC56 AC078899.1-201ENST00000521432 1185 ntBASIC6.12□□□□□ -1.43
PCDH9Q9HC56 AC136777.2-201ENST00000522979 358 ntBASIC6.12□□□□□ -1.43
PCDH9Q9HC56 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 AC078878.1-201ENST00000539832 958 ntBASIC6.12□□□□□ -1.43
PCDH9Q9HC56 AL121594.2-201ENST00000541658 472 ntBASIC6.12□□□□□ -1.43
PCDH9Q9HC56 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 AC126615.2-201ENST00000553003 515 ntBASIC6.12□□□□□ -1.43
PCDH9Q9HC56 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 SNRPGP1-201ENST00000553864 222 ntBASIC6.12□□□□□ -1.43
PCDH9Q9HC56 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 AC090826.1-203ENST00000569235 490 ntBASIC6.12□□□□□ -1.43
PCDH9Q9HC56 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 AC002310.3-201ENST00000569728 723 ntBASIC6.12□□□□□ -1.43
PCDH9Q9HC56 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 AC068768.2-201ENST00000602352 343 ntBASIC6.12□□□□□ -1.43
PCDH9Q9HC56 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.12□□□□□ -1.43
PCDH9Q9HC56 AC004801.6-201ENST00000616571 978 ntBASIC6.12□□□□□ -1.43
PCDH9Q9HC56 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 AL118508.4-201ENST00000624142 1176 ntBASIC6.12□□□□□ -1.43
PCDH9Q9HC56 AL357562.1-201ENST00000624911 609 ntBASIC6.12□□□□□ -1.43
PCDH9Q9HC56 AC073488.3-201ENST00000631611 778 ntBASIC6.12□□□□□ -1.43
PCDH9Q9HC56 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 AP001153.1-201ENST00000641024 338 ntBASIC6.12□□□□□ -1.43
PCDH9Q9HC56 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
PCDH9Q9HC56 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
PCDH9Q9HC56 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PCDH9Q9HC56 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
PCDH9Q9HC56 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.11□□□□□ -1.43
PCDH9Q9HC56 AL355488.2-201ENST00000609909 2850 ntBASIC6.11□□□□□ -1.43
PCDH9Q9HC56 AL354854.1-201ENST00000455940 1363 ntBASIC6.11□□□□□ -1.43
PCDH9Q9HC56 CR383656.5-201ENST00000547616 1340 ntBASIC6.11□□□□□ -1.43
PCDH9Q9HC56 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDH9Q9HC56 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDH9Q9HC56 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDH9Q9HC56 RNA5SP514-201ENST00000363717 111 ntBASIC6.11□□□□□ -1.43
PCDH9Q9HC56 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.11□□□□□ -1.43
PCDH9Q9HC56 AC099677.3-201ENST00000427081 395 ntBASIC6.11□□□□□ -1.43
PCDH9Q9HC56 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.11□□□□□ -1.43
PCDH9Q9HC56 AC007679.3-201ENST00000434035 414 ntBASIC6.11□□□□□ -1.43
PCDH9Q9HC56 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.11□□□□□ -1.43
PCDH9Q9HC56 PFN1P6-201ENST00000476786 399 ntBASIC6.11□□□□□ -1.43
PCDH9Q9HC56 PDCL3P4-201ENST00000489621 720 ntBASIC6.11□□□□□ -1.43
PCDH9Q9HC56 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC6.11□□□□□ -1.43
PCDH9Q9HC56 AL158068.1-201ENST00000506116 616 ntBASIC6.11□□□□□ -1.43
PCDH9Q9HC56 PRMT5P1-201ENST00000514351 598 ntBASIC6.11□□□□□ -1.43
PCDH9Q9HC56 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.11□□□□□ -1.43
PCDH9Q9HC56 AC025857.1-201ENST00000525252 377 ntBASIC6.11□□□□□ -1.43
PCDH9Q9HC56 OR4A42P-201ENST00000531397 938 ntBASIC6.11□□□□□ -1.43
PCDH9Q9HC56 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.11□□□□□ -1.43
PCDH9Q9HC56 AC006512.2-201ENST00000543250 486 ntBASIC6.11□□□□□ -1.43
PCDH9Q9HC56 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.11□□□□□ -1.43
PCDH9Q9HC56 HMGN2P47-201ENST00000559378 272 ntBASIC6.11□□□□□ -1.43
PCDH9Q9HC56 AC092266.1-201ENST00000610958 165 ntBASIC6.11□□□□□ -1.43
PCDH9Q9HC56 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.11□□□□□ -1.43
PCDH9Q9HC56 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC6.11□□□□□ -1.43
PCDH9Q9HC56 AP000550.3-201ENST00000637734 379 ntBASIC6.11□□□□□ -1.43
PCDH9Q9HC56 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDH9Q9HC56 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.11□□□□□ -1.43
PCDH9Q9HC56 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.11□□□□□ -1.43
PCDH9Q9HC56 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PCDH9Q9HC56 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDH9Q9HC56 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDH9Q9HC56 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 AC138907.8-201ENST00000623981 2256 ntBASIC6.1□□□□□ -1.43
PCDH9Q9HC56 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms