Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 NPIPB1P-202ENST00000588786 828 ntBASIC6.31□□□□□ -1.4
EBF3Q9H4W6 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 AC012467.1-201ENST00000607740 256 ntBASIC6.31□□□□□ -1.4
EBF3Q9H4W6 BX323046.1-201ENST00000610145 535 ntBASIC6.31□□□□□ -1.4
EBF3Q9H4W6 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 AL353763.1-201ENST00000624467 1628 ntBASIC6.31□□□□□ -1.4
EBF3Q9H4W6 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 NR1H5P-201ENST00000452683 1377 ntBASIC6.31□□□□□ -1.4
EBF3Q9H4W6 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 AC078880.4-201ENST00000617627 1749 ntBASIC6.3□□□□□ -1.4
EBF3Q9H4W6 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.3□□□□□ -1.4
EBF3Q9H4W6 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
EBF3Q9H4W6 AC011815.2-201ENST00000618230 2021 ntBASIC6.3□□□□□ -1.4
EBF3Q9H4W6 MSL3P1-202ENST00000440028 1468 ntBASIC6.3□□□□□ -1.4
EBF3Q9H4W6 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
EBF3Q9H4W6 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.3□□□□□ -1.4
EBF3Q9H4W6 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.3□□□□□ -1.4
EBF3Q9H4W6 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
EBF3Q9H4W6 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
EBF3Q9H4W6 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
EBF3Q9H4W6 MIR433-201ENST00000384837 93 ntBASIC6.3□□□□□ -1.4
EBF3Q9H4W6 SNORA11B-201ENST00000408175 129 ntBASIC6.3□□□□□ -1.4
EBF3Q9H4W6 EEF1B2P8-201ENST00000414101 671 ntBASIC6.3□□□□□ -1.4
EBF3Q9H4W6 MTATP6P11-201ENST00000428071 670 ntBASIC6.3□□□□□ -1.4
EBF3Q9H4W6 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.3□□□□□ -1.4
EBF3Q9H4W6 AC092865.4-201ENST00000477936 615 ntBASIC6.3□□□□□ -1.4
EBF3Q9H4W6 RN7SL273P-201ENST00000481561 299 ntBASIC6.3□□□□□ -1.4
EBF3Q9H4W6 AP000926.3-201ENST00000497201 299 ntBASIC6.3□□□□□ -1.4
EBF3Q9H4W6 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.3□□□□□ -1.4
EBF3Q9H4W6 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.3□□□□□ -1.4
EBF3Q9H4W6 SETP21-201ENST00000514799 892 ntBASIC6.3□□□□□ -1.4
EBF3Q9H4W6 WBP1LP3-201ENST00000523033 208 ntBASIC6.3□□□□□ -1.4
EBF3Q9H4W6 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC6.3□□□□□ -1.4
EBF3Q9H4W6 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC6.3□□□□□ -1.4
EBF3Q9H4W6 AC073916.1-201ENST00000545095 130 ntBASIC6.3□□□□□ -1.4
EBF3Q9H4W6 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.3□□□□□ -1.4
EBF3Q9H4W6 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.3□□□□□ -1.4
EBF3Q9H4W6 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.3□□□□□ -1.4
EBF3Q9H4W6 AC135626.1-201ENST00000556983 435 ntBASIC6.3□□□□□ -1.4
EBF3Q9H4W6 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC6.3□□□□□ -1.4
EBF3Q9H4W6 AL132657.2-201ENST00000564417 358 ntBASIC6.3□□□□□ -1.4
EBF3Q9H4W6 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC6.3□□□□□ -1.4
EBF3Q9H4W6 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.3□□□□□ -1.4
EBF3Q9H4W6 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.3□□□□□ -1.4
EBF3Q9H4W6 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.3□□□□□ -1.4
EBF3Q9H4W6 AL133406.3-201ENST00000606817 541 ntBASIC6.3□□□□□ -1.4
EBF3Q9H4W6 AC109309.2-201ENST00000612597 332 ntBASIC6.3□□□□□ -1.4
EBF3Q9H4W6 AP005431.1-201ENST00000618479 319 ntBASIC6.3□□□□□ -1.4
EBF3Q9H4W6 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.3□□□□□ -1.4
EBF3Q9H4W6 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC6.3□□□□□ -1.4
EBF3Q9H4W6 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
EBF3Q9H4W6 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.3□□□□□ -1.4
EBF3Q9H4W6 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
EBF3Q9H4W6 AC010329.1-201ENST00000593903 8328 ntBASIC6.3□□□□□ -1.4
EBF3Q9H4W6 BIN2P1-201ENST00000504996 1530 ntBASIC6.3□□□□□ -1.4
EBF3Q9H4W6 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
EBF3Q9H4W6 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
EBF3Q9H4W6 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.29□□□□□ -1.4
EBF3Q9H4W6 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
EBF3Q9H4W6 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.29□□□□□ -1.4
EBF3Q9H4W6 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
EBF3Q9H4W6 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.29□□□□□ -1.4
EBF3Q9H4W6 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
EBF3Q9H4W6 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
EBF3Q9H4W6 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.29□□□□□ -1.4
EBF3Q9H4W6 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
EBF3Q9H4W6 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
EBF3Q9H4W6 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
EBF3Q9H4W6 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
EBF3Q9H4W6 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.29□□□□□ -1.4
EBF3Q9H4W6 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
EBF3Q9H4W6 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.29□□□□□ -1.4
EBF3Q9H4W6 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
EBF3Q9H4W6 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
EBF3Q9H4W6 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.29□□□□□ -1.4
EBF3Q9H4W6 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
EBF3Q9H4W6 RNA5SP242-201ENST00000364171 118 ntBASIC6.29□□□□□ -1.4
EBF3Q9H4W6 RN7SKP292-201ENST00000365522 317 ntBASIC6.29□□□□□ -1.4
EBF3Q9H4W6 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.29□□□□□ -1.4
EBF3Q9H4W6 TRGV5P-201ENST00000419915 354 ntBASIC6.29□□□□□ -1.4
EBF3Q9H4W6 BX284632.2-201ENST00000421091 399 ntBASIC6.29□□□□□ -1.4
EBF3Q9H4W6 AL035660.1-201ENST00000422041 222 ntBASIC6.29□□□□□ -1.4
EBF3Q9H4W6 NFYAP1-201ENST00000431953 972 ntBASIC6.29□□□□□ -1.4
EBF3Q9H4W6 GAPDHP75-201ENST00000433910 943 ntBASIC6.29□□□□□ -1.4
EBF3Q9H4W6 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.29□□□□□ -1.4
EBF3Q9H4W6 ZNF101P1-201ENST00000435701 1720 ntBASIC6.29□□□□□ -1.4
EBF3Q9H4W6 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.29□□□□□ -1.4
EBF3Q9H4W6 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.29□□□□□ -1.4
EBF3Q9H4W6 VN1R110P-201ENST00000438988 971 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms