Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC138907.8-201ENST00000623981 2256 ntBASIC6.09□□□□□ -1.43
TRIM4Q9C037 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM4Q9C037 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM4Q9C037 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
TRIM4Q9C037 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM4Q9C037 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM4Q9C037 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.09□□□□□ -1.43
TRIM4Q9C037 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.09□□□□□ -1.43
TRIM4Q9C037 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.09□□□□□ -1.43
TRIM4Q9C037 U3.43-201ENST00000410734 213 ntBASIC6.09□□□□□ -1.43
TRIM4Q9C037 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM4Q9C037 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.09□□□□□ -1.43
TRIM4Q9C037 RPL23AP19-201ENST00000436229 369 ntBASIC6.09□□□□□ -1.43
TRIM4Q9C037 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.09□□□□□ -1.43
TRIM4Q9C037 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM4Q9C037 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.09□□□□□ -1.43
TRIM4Q9C037 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.09□□□□□ -1.43
TRIM4Q9C037 AP002453.1-201ENST00000492327 668 ntBASIC6.09□□□□□ -1.43
TRIM4Q9C037 RBBP4P1-201ENST00000502424 1276 ntBASIC6.09□□□□□ -1.43
TRIM4Q9C037 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM4Q9C037 SNORD46.2-201ENST00000516021 102 ntBASIC6.09□□□□□ -1.43
TRIM4Q9C037 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM4Q9C037 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.09□□□□□ -1.43
TRIM4Q9C037 AC079905.1-201ENST00000549280 475 ntBASIC6.09□□□□□ -1.43
TRIM4Q9C037 AL390726.5-202ENST00000564800 256 ntBASIC6.09□□□□□ -1.43
TRIM4Q9C037 AC092718.4-201ENST00000566639 716 ntBASIC6.09□□□□□ -1.43
TRIM4Q9C037 AC009852.2-201ENST00000567898 485 ntBASIC6.09□□□□□ -1.43
TRIM4Q9C037 SYPL1P2-201ENST00000582878 727 ntBASIC6.09□□□□□ -1.43
TRIM4Q9C037 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM4Q9C037 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.09□□□□□ -1.43
TRIM4Q9C037 AC114477.1-201ENST00000605097 605 ntBASIC6.09□□□□□ -1.43
TRIM4Q9C037 AC024255.1-201ENST00000614376 102 ntBASIC6.09□□□□□ -1.43
TRIM4Q9C037 AC127024.6-201ENST00000621598 424 ntBASIC6.09□□□□□ -1.43
TRIM4Q9C037 FO681491.1-202ENST00000623392 737 ntBASIC6.09□□□□□ -1.43
TRIM4Q9C037 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM4Q9C037 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM4Q9C037 AC139426.3-201ENST00000605648 2059 ntBASIC6.09□□□□□ -1.43
TRIM4Q9C037 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM4Q9C037 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM4Q9C037 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
TRIM4Q9C037 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.09□□□□□ -1.44
TRIM4Q9C037 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.09□□□□□ -1.44
TRIM4Q9C037 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
TRIM4Q9C037 AL031595.2-201ENST00000624215 19071 ntBASIC6.09□□□□□ -1.44
TRIM4Q9C037 AC105235.1-201ENST00000623208 1816 ntBASIC6.09□□□□□ -1.44
TRIM4Q9C037 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM4Q9C037 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
TRIM4Q9C037 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.08□□□□□ -1.44
TRIM4Q9C037 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM4Q9C037 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
TRIM4Q9C037 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM4Q9C037 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM4Q9C037 RNA5SP187-201ENST00000384400 119 ntBASIC6.08□□□□□ -1.44
TRIM4Q9C037 MIR1178-201ENST00000408396 91 ntBASIC6.08□□□□□ -1.44
TRIM4Q9C037 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
TRIM4Q9C037 CDY17P-201ENST00000414121 1282 ntBASIC6.08□□□□□ -1.44
TRIM4Q9C037 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM4Q9C037 OSTCP4-201ENST00000424397 449 ntBASIC6.08□□□□□ -1.44
TRIM4Q9C037 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM4Q9C037 BX276092.6-201ENST00000430476 250 ntBASIC6.08□□□□□ -1.44
TRIM4Q9C037 PNKDP1-201ENST00000435914 430 ntBASIC6.08□□□□□ -1.44
TRIM4Q9C037 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM4Q9C037 VN1R38P-201ENST00000450265 887 ntBASIC6.08□□□□□ -1.44
TRIM4Q9C037 BX276092.8-201ENST00000455722 250 ntBASIC6.08□□□□□ -1.44
TRIM4Q9C037 PSMA2P2-201ENST00000504319 686 ntBASIC6.08□□□□□ -1.44
TRIM4Q9C037 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM4Q9C037 SNX18P24-201ENST00000505249 671 ntBASIC6.08□□□□□ -1.44
TRIM4Q9C037 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM4Q9C037 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM4Q9C037 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM4Q9C037 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.08□□□□□ -1.44
TRIM4Q9C037 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.08□□□□□ -1.44
TRIM4Q9C037 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.08□□□□□ -1.44
TRIM4Q9C037 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.08□□□□□ -1.44
TRIM4Q9C037 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.08□□□□□ -1.44
TRIM4Q9C037 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM4Q9C037 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM4Q9C037 AC027279.4-201ENST00000624371 2072 ntBASIC6.08□□□□□ -1.44
TRIM4Q9C037 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
TRIM4Q9C037 AC026523.2-201ENST00000625039 7739 ntBASIC6.08□□□□□ -1.44
TRIM4Q9C037 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM4Q9C037 CR788268.1-201ENST00000603931 1809 ntBASIC6.07□□□□□ -1.44
TRIM4Q9C037 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM4Q9C037 RPS2P45-201ENST00000469997 2057 ntBASIC6.07□□□□□ -1.44
TRIM4Q9C037 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM4Q9C037 MRPS6P2-201ENST00000381143 370 ntBASIC6.07□□□□□ -1.44
TRIM4Q9C037 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
TRIM4Q9C037 AC136624.1-201ENST00000400791 413 ntBASIC6.07□□□□□ -1.44
TRIM4Q9C037 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM4Q9C037 MTND2P12-201ENST00000417560 1252 ntBASIC6.07□□□□□ -1.44
TRIM4Q9C037 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
TRIM4Q9C037 MED28P4-201ENST00000433137 572 ntBASIC6.07□□□□□ -1.44
TRIM4Q9C037 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM4Q9C037 AL161636.2-201ENST00000445179 927 ntBASIC6.07□□□□□ -1.44
TRIM4Q9C037 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM4Q9C037 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.07□□□□□ -1.44
TRIM4Q9C037 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.07□□□□□ -1.44
TRIM4Q9C037 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM4Q9C037 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM4Q9C037 RPL12P31-201ENST00000478433 450 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms