Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AL078595.2-201ENST00000605309 1780 ntBASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 EIF4A1P6-201ENST00000448133 1210 ntBASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 RN7SL515P-201ENST00000463999 297 ntBASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 NENFP3-201ENST00000503735 313 ntBASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 AC138409.2-202ENST00000507274 458 ntBASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 HMGN2P36-201ENST00000529541 409 ntBASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 AC015802.2-201ENST00000589690 189 ntBASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 AC021766.1-201ENST00000624404 741 ntBASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 AC078880.4-201ENST00000617627 1749 ntBASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 OR10AB1P-202ENST00000641219 1686 ntBASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 PARP4P1-201ENST00000435945 2337 ntBASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
RTFDC1Q9BY42 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 AC005261.2-201ENST00000593427 4258 ntBASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 RNA5SP394-201ENST00000364216 119 ntBASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 AL355433.1-201ENST00000422804 300 ntBASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 AP000949.1-201ENST00000438328 629 ntBASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 AC074367.1-201ENST00000438685 1125 ntBASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 RN7SL57P-201ENST00000493687 290 ntBASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 DUTP7-201ENST00000507982 486 ntBASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 RNA5SP34-201ENST00000516887 130 ntBASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 OR6M2P-201ENST00000529831 871 ntBASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 OR4H6P-202ENST00000603819 340 ntBASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 AL021707.7-201ENST00000607991 416 ntBASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 AL445670.1-201ENST00000618889 801 ntBASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RTFDC1Q9BY42 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
RTFDC1Q9BY42 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.36□□□□□ -1.23
RTFDC1Q9BY42 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RTFDC1Q9BY42 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RTFDC1Q9BY42 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
RTFDC1Q9BY42 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.36□□□□□ -1.23
RTFDC1Q9BY42 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms