Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.85□□□□□ -1.63
HDHD3Q9BSH5 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HDHD3Q9BSH5 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.85□□□□□ -1.63
HDHD3Q9BSH5 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC4.85□□□□□ -1.63
HDHD3Q9BSH5 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HDHD3Q9BSH5 AC145423.1-201ENST00000605712 336 ntBASIC4.85□□□□□ -1.63
HDHD3Q9BSH5 AC015819.1-201ENST00000613588 663 ntBASIC4.85□□□□□ -1.63
HDHD3Q9BSH5 AC004801.6-201ENST00000616571 978 ntBASIC4.85□□□□□ -1.63
HDHD3Q9BSH5 RNA5SP439-201ENST00000617595 124 ntBASIC4.85□□□□□ -1.63
HDHD3Q9BSH5 FAM27E2-201ENST00000619668 403 ntBASIC4.85□□□□□ -1.63
HDHD3Q9BSH5 AC005899.6-201ENST00000620729 297 ntBASIC4.85□□□□□ -1.63
HDHD3Q9BSH5 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC4.85□□□□□ -1.63
HDHD3Q9BSH5 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HDHD3Q9BSH5 AL592429.1-201ENST00000403909 1473 ntBASIC4.85□□□□□ -1.63
HDHD3Q9BSH5 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HDHD3Q9BSH5 UGT2B24P-201ENST00000514441 1597 ntBASIC4.85□□□□□ -1.63
HDHD3Q9BSH5 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
HDHD3Q9BSH5 NLRP3P1-201ENST00000622303 1785 ntBASIC4.85□□□□□ -1.63
HDHD3Q9BSH5 NCOA4P2-201ENST00000340589 1813 ntBASIC4.85□□□□□ -1.63
HDHD3Q9BSH5 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
HDHD3Q9BSH5 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
HDHD3Q9BSH5 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HDHD3Q9BSH5 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HDHD3Q9BSH5 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
HDHD3Q9BSH5 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HDHD3Q9BSH5 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HDHD3Q9BSH5 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
HDHD3Q9BSH5 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HDHD3Q9BSH5 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 AL354854.1-201ENST00000455940 1363 ntBASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 RNA5SP326-201ENST00000363209 110 ntBASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 RN7SKP145-201ENST00000363291 303 ntBASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 SNORA70.6-201ENST00000383934 134 ntBASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 AC096921.1-201ENST00000411661 375 ntBASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 VN1R21P-201ENST00000426703 765 ntBASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 GAPDHP48-201ENST00000436626 961 ntBASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 RPS7P6-201ENST00000485777 579 ntBASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 RPS27P20-201ENST00000492051 246 ntBASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 SNRPCP11-201ENST00000492453 205 ntBASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 GLUD1P3-202ENST00000508551 200 ntBASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 NACAP5-201ENST00000509863 636 ntBASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 MT1CP-201ENST00000567054 174 ntBASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 AC073389.3-201ENST00000609434 935 ntBASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 AL139099.4-201ENST00000614802 114 ntBASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 uc_338.29-201ENST00000615099 168 ntBASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 AC010809.3-201ENST00000621310 641 ntBASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 AL138693.1-201ENST00000622219 129 ntBASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 AL136228.1-201ENST00000622221 319 ntBASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HDHD3Q9BSH5 AC068870.1-201ENST00000563737 2455 ntBASIC4.84□□□□□ -1.64
HDHD3Q9BSH5 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
HDHD3Q9BSH5 GDA-209ENST00000545168 5362 ntTSL 2 BASIC4.84□□□□□ -1.64
HDHD3Q9BSH5 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HDHD3Q9BSH5 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
HDHD3Q9BSH5 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 RNA5SP279-201ENST00000365513 117 ntBASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 MIR130B-202ENST00000385018 82 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 530.3 ms