Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC015982.1-201ENST00000608113 465 ntBASIC6.11□□□□□ -1.43
RPRD1AQ96P16 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RPRD1AQ96P16 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.11□□□□□ -1.43
RPRD1AQ96P16 AP001962.1-201ENST00000624114 559 ntBASIC6.11□□□□□ -1.43
RPRD1AQ96P16 AC069542.2-201ENST00000624816 216 ntBASIC6.11□□□□□ -1.43
RPRD1AQ96P16 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.11□□□□□ -1.43
RPRD1AQ96P16 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RPRD1AQ96P16 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
RPRD1AQ96P16 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.11□□□□□ -1.43
RPRD1AQ96P16 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.11□□□□□ -1.43
RPRD1AQ96P16 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
RPRD1AQ96P16 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RPRD1AQ96P16 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RPRD1AQ96P16 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
RPRD1AQ96P16 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
RPRD1AQ96P16 ICE2P1-201ENST00000512800 1849 ntBASIC6.11□□□□□ -1.43
RPRD1AQ96P16 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
RPRD1AQ96P16 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 U3.23-201ENST00000391132 200 ntBASIC6.1□□□□□ -1.43
RPRD1AQ96P16 LYPLA1P3-201ENST00000402650 695 ntBASIC6.1□□□□□ -1.43
RPRD1AQ96P16 MIR1203-201ENST00000408812 85 ntBASIC6.1□□□□□ -1.43
RPRD1AQ96P16 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 RPS3P2-201ENST00000421346 701 ntBASIC6.1□□□□□ -1.43
RPRD1AQ96P16 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 AC079807.1-201ENST00000429993 481 ntBASIC6.1□□□□□ -1.43
RPRD1AQ96P16 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 AL663074.2-201ENST00000440621 479 ntBASIC6.1□□□□□ -1.43
RPRD1AQ96P16 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 PFN1P6-201ENST00000476786 399 ntBASIC6.1□□□□□ -1.43
RPRD1AQ96P16 RN7SL57P-201ENST00000493687 290 ntBASIC6.1□□□□□ -1.43
RPRD1AQ96P16 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 AC008429.4-201ENST00000521201 182 ntBASIC6.1□□□□□ -1.43
RPRD1AQ96P16 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 AC006530.1-201ENST00000555980 571 ntBASIC6.1□□□□□ -1.43
RPRD1AQ96P16 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 GARSP1-201ENST00000570895 719 ntBASIC6.1□□□□□ -1.43
RPRD1AQ96P16 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 FAM27E4-201ENST00000605259 342 ntBASIC6.1□□□□□ -1.43
RPRD1AQ96P16 AL139099.4-201ENST00000614802 114 ntBASIC6.1□□□□□ -1.43
RPRD1AQ96P16 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.1□□□□□ -1.43
RPRD1AQ96P16 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 AC011504.1-201ENST00000623331 4103 ntBASIC6.1□□□□□ -1.43
RPRD1AQ96P16 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 BRAFP1-201ENST00000445336 2703 ntBASIC6.1□□□□□ -1.43
RPRD1AQ96P16 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
RPRD1AQ96P16 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.09□□□□□ -1.43
RPRD1AQ96P16 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.09□□□□□ -1.43
RPRD1AQ96P16 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
RPRD1AQ96P16 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RPRD1AQ96P16 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RPRD1AQ96P16 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RPRD1AQ96P16 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.09□□□□□ -1.43
RPRD1AQ96P16 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.09□□□□□ -1.43
RPRD1AQ96P16 AC114876.1-201ENST00000490962 1366 ntBASIC6.09□□□□□ -1.43
RPRD1AQ96P16 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RPRD1AQ96P16 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.09□□□□□ -1.43
RPRD1AQ96P16 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.09□□□□□ -1.43
RPRD1AQ96P16 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
RPRD1AQ96P16 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
RPRD1AQ96P16 AL121835.1-201ENST00000404250 354 ntBASIC6.09□□□□□ -1.43
RPRD1AQ96P16 AL035660.1-201ENST00000422041 222 ntBASIC6.09□□□□□ -1.43
RPRD1AQ96P16 BX323845.3-201ENST00000428215 527 ntBASIC6.09□□□□□ -1.43
RPRD1AQ96P16 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.09□□□□□ -1.43
RPRD1AQ96P16 AC126120.1-201ENST00000431082 470 ntBASIC6.09□□□□□ -1.43
RPRD1AQ96P16 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.09□□□□□ -1.43
RPRD1AQ96P16 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.09□□□□□ -1.43
RPRD1AQ96P16 AC144530.1-201ENST00000452862 555 ntBASIC6.09□□□□□ -1.43
RPRD1AQ96P16 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.09□□□□□ -1.43
RPRD1AQ96P16 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.09□□□□□ -1.43
RPRD1AQ96P16 GAPDHP71-201ENST00000511530 1003 ntBASIC6.09□□□□□ -1.43
RPRD1AQ96P16 NPM1P21-201ENST00000513394 762 ntBASIC6.09□□□□□ -1.43
RPRD1AQ96P16 RN7SKP248-201ENST00000516278 305 ntBASIC6.09□□□□□ -1.43
RPRD1AQ96P16 AP004609.2-201ENST00000532177 190 ntBASIC6.09□□□□□ -1.43
RPRD1AQ96P16 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms