Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 AP005432.1-201ENST00000580891 3485 ntBASIC5.8□□□□□ -1.48
VPS33AQ96AX1 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 AL355488.2-201ENST00000609909 2850 ntBASIC5.8□□□□□ -1.48
VPS33AQ96AX1 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 PPBPP2-201ENST00000513150 1362 ntBASIC5.8□□□□□ -1.48
VPS33AQ96AX1 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 AC011416.1-201ENST00000514947 1732 ntBASIC5.79□□□□□ -1.48
VPS33AQ96AX1 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 RNU6-1263P-201ENST00000384601 106 ntBASIC5.79□□□□□ -1.48
VPS33AQ96AX1 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 OSTCP4-201ENST00000424397 449 ntBASIC5.79□□□□□ -1.48
VPS33AQ96AX1 RPS19P6-201ENST00000441327 433 ntBASIC5.79□□□□□ -1.48
VPS33AQ96AX1 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.79□□□□□ -1.48
VPS33AQ96AX1 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 NPM1P9-201ENST00000453156 844 ntBASIC5.79□□□□□ -1.48
VPS33AQ96AX1 RPL31P11-202ENST00000454082 372 ntBASIC5.79□□□□□ -1.48
VPS33AQ96AX1 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 AC122714.1-201ENST00000502510 459 ntBASIC5.79□□□□□ -1.48
VPS33AQ96AX1 CCDC11P1-201ENST00000503137 1162 ntBASIC5.79□□□□□ -1.48
VPS33AQ96AX1 PSMA2P2-201ENST00000504319 686 ntBASIC5.79□□□□□ -1.48
VPS33AQ96AX1 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 AC093816.1-201ENST00000515076 913 ntBASIC5.79□□□□□ -1.48
VPS33AQ96AX1 snoU109.5-201ENST00000516231 132 ntBASIC5.79□□□□□ -1.48
VPS33AQ96AX1 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 AC104997.1-201ENST00000519761 717 ntBASIC5.79□□□□□ -1.48
VPS33AQ96AX1 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 MTND2P13-201ENST00000577438 1039 ntBASIC5.79□□□□□ -1.48
VPS33AQ96AX1 AC005224.3-201ENST00000584683 2140 ntBASIC5.79□□□□□ -1.48
VPS33AQ96AX1 AC026898.1-201ENST00000586404 571 ntBASIC5.79□□□□□ -1.48
VPS33AQ96AX1 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 AC036176.3-201ENST00000602456 418 ntBASIC5.79□□□□□ -1.48
VPS33AQ96AX1 OR51C1P-201ENST00000608504 942 ntBASIC5.79□□□□□ -1.48
VPS33AQ96AX1 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 AC109446.4-201ENST00000623235 2755 ntBASIC5.79□□□□□ -1.48
VPS33AQ96AX1 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS33AQ96AX1 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.79□□□□□ -1.48
VPS33AQ96AX1 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 AL034546.1-201ENST00000623740 3693 ntBASIC5.78□□□□□ -1.48
VPS33AQ96AX1 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 AC083799.1-201ENST00000366451 910 ntBASIC5.78□□□□□ -1.48
VPS33AQ96AX1 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 RNA5SP105-201ENST00000391123 113 ntBASIC5.78□□□□□ -1.48
VPS33AQ96AX1 GAPDHP15-201ENST00000398586 975 ntBASIC5.78□□□□□ -1.48
VPS33AQ96AX1 MIR1266-201ENST00000408125 84 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms