Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC8.18□□□□□ -1.1
HLA-CQ95604 AC007537.2-201ENST00000472093 511 ntBASIC8.18□□□□□ -1.1
HLA-CQ95604 RN7SL861P-201ENST00000473793 285 ntBASIC8.18□□□□□ -1.1
HLA-CQ95604 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC8.18□□□□□ -1.1
HLA-CQ95604 NPM1P27-201ENST00000502784 830 ntBASIC8.18□□□□□ -1.1
HLA-CQ95604 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
HLA-CQ95604 NDUFA3P2-201ENST00000531434 232 ntBASIC8.18□□□□□ -1.1
HLA-CQ95604 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
HLA-CQ95604 AC087257.2-201ENST00000538759 928 ntBASIC8.18□□□□□ -1.1
HLA-CQ95604 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC8.18□□□□□ -1.1
HLA-CQ95604 AC008127.2-201ENST00000549925 1075 ntBASIC8.18□□□□□ -1.1
HLA-CQ95604 AL163952.1-202ENST00000569625 600 ntBASIC8.18□□□□□ -1.1
HLA-CQ95604 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC8.18□□□□□ -1.1
HLA-CQ95604 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC8.18□□□□□ -1.1
HLA-CQ95604 MIR3682-201ENST00000581338 84 ntBASIC8.18□□□□□ -1.1
HLA-CQ95604 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC8.18□□□□□ -1.1
HLA-CQ95604 AC011712.1-201ENST00000588959 234 ntBASIC8.18□□□□□ -1.1
HLA-CQ95604 AC007136.1-201ENST00000589141 199 ntBASIC8.18□□□□□ -1.1
HLA-CQ95604 DYNLL1P1-201ENST00000595442 269 ntBASIC8.18□□□□□ -1.1
HLA-CQ95604 AC112191.3-201ENST00000604371 277 ntBASIC8.18□□□□□ -1.1
HLA-CQ95604 AC019257.2-201ENST00000605539 497 ntBASIC8.18□□□□□ -1.1
HLA-CQ95604 AC068880.5-201ENST00000624331 290 ntBASIC8.18□□□□□ -1.1
HLA-CQ95604 AC073488.7-201ENST00000633785 778 ntBASIC8.18□□□□□ -1.1
HLA-CQ95604 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC8.18□□□□□ -1.1
HLA-CQ95604 ZNF714-201ENST00000425625 2562 ntTSL 5 BASIC8.18□□□□□ -1.1
HLA-CQ95604 PFKM-203ENST00000359794 3228 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HLA-CQ95604 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC8.18□□□□□ -1.1
HLA-CQ95604 DYNLT1-202ENST00000367088 2891 ntTSL 2 BASIC8.18□□□□□ -1.1
HLA-CQ95604 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
HLA-CQ95604 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC8.18□□□□□ -1.1
HLA-CQ95604 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HLA-CQ95604 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC8.18□□□□□ -1.1
HLA-CQ95604 KLKB1-201ENST00000264690 2363 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HLA-CQ95604 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
HLA-CQ95604 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC8.17□□□□□ -1.1
HLA-CQ95604 SORBS1-201ENST00000277982 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
HLA-CQ95604 SERPINA9-202ENST00000337425 1755 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HLA-CQ95604 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
HLA-CQ95604 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
HLA-CQ95604 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HLA-CQ95604 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC8.17□□□□□ -1.1
HLA-CQ95604 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HLA-CQ95604 LRRC40-201ENST00000370952 2884 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HLA-CQ95604 AL137058.3-201ENST00000624531 3099 ntBASIC8.17□□□□□ -1.1
HLA-CQ95604 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HLA-CQ95604 IARS2P1-201ENST00000508226 3173 ntBASIC8.17□□□□□ -1.1
HLA-CQ95604 ZNF385B-203ENST00000409692 2109 ntTSL 5 BASIC8.17□□□□□ -1.1
HLA-CQ95604 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HLA-CQ95604 FLI1-202ENST00000344954 3427 ntTSL 2 BASIC8.17□□□□□ -1.1
HLA-CQ95604 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
HLA-CQ95604 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HLA-CQ95604 CAB39L-202ENST00000355854 3676 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HLA-CQ95604 ZNF252P-208ENST00000592792 2485 ntBASIC8.17□□□□□ -1.1
HLA-CQ95604 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HLA-CQ95604 Y_RNA.1-201ENST00000352915 104 ntBASIC8.17□□□□□ -1.1
HLA-CQ95604 RNU6-462P-201ENST00000362659 105 ntBASIC8.17□□□□□ -1.1
HLA-CQ95604 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC8.17□□□□□ -1.1
HLA-CQ95604 FTH1P3-201ENST00000394290 584 ntBASIC8.17□□□□□ -1.1
HLA-CQ95604 YWHAZP6-201ENST00000399764 738 ntBASIC8.17□□□□□ -1.1
HLA-CQ95604 GGA1-205ENST00000405147 575 ntTSL 4 BASIC8.17□□□□□ -1.1
HLA-CQ95604 LARP1P1-201ENST00000407692 292 ntBASIC8.17□□□□□ -1.1
HLA-CQ95604 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HLA-CQ95604 HMGB1P11-201ENST00000413899 637 ntBASIC8.17□□□□□ -1.1
HLA-CQ95604 HMGB3P20-201ENST00000417997 600 ntBASIC8.17□□□□□ -1.1
HLA-CQ95604 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC8.17□□□□□ -1.1
HLA-CQ95604 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC8.17□□□□□ -1.1
HLA-CQ95604 CYP4F34P-201ENST00000425951 481 ntBASIC8.17□□□□□ -1.1
HLA-CQ95604 AC007559.1-201ENST00000428736 355 ntBASIC8.17□□□□□ -1.1
HLA-CQ95604 Z98752.2-201ENST00000432727 312 ntBASIC8.17□□□□□ -1.1
HLA-CQ95604 RPL7P11-201ENST00000437586 658 ntBASIC8.17□□□□□ -1.1
HLA-CQ95604 AC140076.1-201ENST00000449897 361 ntBASIC8.17□□□□□ -1.1
HLA-CQ95604 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC8.17□□□□□ -1.1
HLA-CQ95604 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
HLA-CQ95604 AC087385.2-201ENST00000477729 498 ntBASIC8.17□□□□□ -1.1
HLA-CQ95604 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC8.17□□□□□ -1.1
HLA-CQ95604 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC8.17□□□□□ -1.1
HLA-CQ95604 KCTD9P2-201ENST00000512203 1013 ntBASIC8.17□□□□□ -1.1
HLA-CQ95604 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC8.17□□□□□ -1.1
HLA-CQ95604 RNU6-416P-201ENST00000516265 103 ntBASIC8.17□□□□□ -1.1
HLA-CQ95604 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC8.17□□□□□ -1.1
HLA-CQ95604 CASC19-203ENST00000523510 575 ntTSL 3 BASIC8.17□□□□□ -1.1
HLA-CQ95604 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC8.17□□□□□ -1.1
HLA-CQ95604 AC068631.3-201ENST00000538831 225 ntBASIC8.17□□□□□ -1.1
HLA-CQ95604 AL390334.1-201ENST00000556395 450 ntBASIC8.17□□□□□ -1.1
HLA-CQ95604 AC107958.1-201ENST00000556576 290 ntBASIC8.17□□□□□ -1.1
HLA-CQ95604 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC8.17□□□□□ -1.1
HLA-CQ95604 AC037471.2-201ENST00000564941 598 ntBASIC8.17□□□□□ -1.1
HLA-CQ95604 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC8.17□□□□□ -1.1
HLA-CQ95604 PRR13P4-201ENST00000577786 421 ntBASIC8.17□□□□□ -1.1
HLA-CQ95604 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC8.17□□□□□ -1.1
HLA-CQ95604 MIR5697-201ENST00000578045 78 ntBASIC8.17□□□□□ -1.1
HLA-CQ95604 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC8.17□□□□□ -1.1
HLA-CQ95604 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC8.17□□□□□ -1.1
HLA-CQ95604 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC8.17□□□□□ -1.1
HLA-CQ95604 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC8.17□□□□□ -1.1
HLA-CQ95604 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC8.17□□□□□ -1.1
HLA-CQ95604 AC108451.2-201ENST00000603875 538 ntBASIC8.17□□□□□ -1.1
HLA-CQ95604 RNU6ATAC35P-201ENST00000609276 444 ntBASIC8.17□□□□□ -1.1
HLA-CQ95604 Z95327.3-201ENST00000610385 572 ntBASIC8.17□□□□□ -1.1
HLA-CQ95604 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms