Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
TRAF3IP1Q8TDR0 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRAF3IP1Q8TDR0 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.16□□□□□ -1.42
TRAF3IP1Q8TDR0 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRAF3IP1Q8TDR0 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRAF3IP1Q8TDR0 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRAF3IP1Q8TDR0 AC012254.3-201ENST00000591183 2117 ntBASIC6.16□□□□□ -1.42
TRAF3IP1Q8TDR0 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
TRAF3IP1Q8TDR0 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 AC083837.1-201ENST00000565297 2994 ntBASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 HSPD1P9-201ENST00000420325 1636 ntBASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 RN7SKP86-201ENST00000410454 332 ntBASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 FAM183DP-201ENST00000421987 399 ntBASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 RPS7P3-201ENST00000443360 580 ntBASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 MTND4LP12-201ENST00000448237 295 ntBASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 AL445466.1-201ENST00000448432 357 ntBASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 AC098847.1-201ENST00000473094 348 ntBASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 AC092865.4-201ENST00000477936 615 ntBASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 AC135999.1-201ENST00000478962 479 ntBASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 OR2A3P-201ENST00000493774 953 ntBASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 AC090424.1-201ENST00000535243 736 ntBASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 AC092332.1-201ENST00000563684 829 ntBASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 AL713998.2-201ENST00000604538 1198 ntBASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 AL021918.2-201ENST00000613415 194 ntBASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 AL031658.2-201ENST00000616850 651 ntBASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 AC073488.3-201ENST00000631611 778 ntBASIC6.15□□□□□ -1.42
TRAF3IP1Q8TDR0 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.15□□□□□ -1.43
TRAF3IP1Q8TDR0 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
TRAF3IP1Q8TDR0 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.15□□□□□ -1.43
TRAF3IP1Q8TDR0 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.15□□□□□ -1.43
TRAF3IP1Q8TDR0 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.15□□□□□ -1.43
TRAF3IP1Q8TDR0 RBPJP7-201ENST00000442803 1447 ntBASIC6.15□□□□□ -1.43
TRAF3IP1Q8TDR0 RBPJP5-201ENST00000449433 1447 ntBASIC6.15□□□□□ -1.43
TRAF3IP1Q8TDR0 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
TRAF3IP1Q8TDR0 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
TRAF3IP1Q8TDR0 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.15□□□□□ -1.43
TRAF3IP1Q8TDR0 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.15□□□□□ -1.43
TRAF3IP1Q8TDR0 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
TRAF3IP1Q8TDR0 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 ICE2P1-201ENST00000512800 1849 ntBASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 RNA5SP232-201ENST00000364144 119 ntBASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 GCNT1P4-201ENST00000404096 329 ntBASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 AL590399.2-201ENST00000427536 309 ntBASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 RPSAP65-201ENST00000429660 595 ntBASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 USP24P1-201ENST00000433802 779 ntBASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 AL445928.1-201ENST00000435545 222 ntBASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 RPL6P30-201ENST00000443382 862 ntBASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 RPL5P7-201ENST00000444235 813 ntBASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 RNU1-88P-201ENST00000459274 128 ntBASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 snoU13.29-201ENST00000459370 104 ntBASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 AC023245.1-201ENST00000468501 517 ntBASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 AC135626.1-201ENST00000556983 435 ntBASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 MIR3154-201ENST00000577829 84 ntBASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 MIR4502-201ENST00000580432 81 ntBASIC6.14□□□□□ -1.43
TRAF3IP1Q8TDR0 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms