Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 RNA5SP429-201ENST00000363688 109 ntBASIC4.31□□□□□ -1.72
NUP35Q8NFH5 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 RPS7P8-201ENST00000418311 581 ntBASIC4.31□□□□□ -1.72
NUP35Q8NFH5 CDC42P6-201ENST00000421246 576 ntBASIC4.31□□□□□ -1.72
NUP35Q8NFH5 E2F6P1-201ENST00000428850 745 ntBASIC4.31□□□□□ -1.72
NUP35Q8NFH5 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 GTF3AP6-201ENST00000432585 986 ntBASIC4.31□□□□□ -1.72
NUP35Q8NFH5 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 NDUFB4P8-201ENST00000435351 367 ntBASIC4.31□□□□□ -1.72
NUP35Q8NFH5 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 RPS12P17-201ENST00000438591 377 ntBASIC4.31□□□□□ -1.72
NUP35Q8NFH5 E2F6P3-201ENST00000441743 743 ntBASIC4.31□□□□□ -1.72
NUP35Q8NFH5 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 POU5F1P5-201ENST00000445059 658 ntBASIC4.31□□□□□ -1.72
NUP35Q8NFH5 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 AL079303.1-201ENST00000486611 463 ntBASIC4.31□□□□□ -1.72
NUP35Q8NFH5 ENPP7P11-201ENST00000505915 627 ntBASIC4.31□□□□□ -1.72
NUP35Q8NFH5 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 TMEM97P2-201ENST00000517841 403 ntBASIC4.31□□□□□ -1.72
NUP35Q8NFH5 IGLVVII-41-1-201ENST00000518405 151 ntBASIC4.31□□□□□ -1.72
NUP35Q8NFH5 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.31□□□□□ -1.72
NUP35Q8NFH5 AC023080.1-201ENST00000551663 931 ntBASIC4.31□□□□□ -1.72
NUP35Q8NFH5 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 RN7SL131P-201ENST00000579043 256 ntBASIC4.31□□□□□ -1.72
NUP35Q8NFH5 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 AL589743.6-201ENST00000611025 117 ntBASIC4.31□□□□□ -1.72
NUP35Q8NFH5 OR8G7P-201ENST00000616658 848 ntBASIC4.31□□□□□ -1.72
NUP35Q8NFH5 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 HSPD1P7-201ENST00000447985 1686 ntBASIC4.31□□□□□ -1.72
NUP35Q8NFH5 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NUP35Q8NFH5 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NUP35Q8NFH5 ING3-204ENST00000431467 1447 ntTSL 2 BASIC4.3□□□□□ -1.72
NUP35Q8NFH5 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NUP35Q8NFH5 AC112198.2-201ENST00000426589 6996 ntBASIC4.3□□□□□ -1.72
NUP35Q8NFH5 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
NUP35Q8NFH5 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
NUP35Q8NFH5 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NUP35Q8NFH5 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NUP35Q8NFH5 CRP-204ENST00000368112 787 ntTSL 2 BASIC4.3□□□□□ -1.72
NUP35Q8NFH5 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC4.3□□□□□ -1.72
NUP35Q8NFH5 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NUP35Q8NFH5 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NUP35Q8NFH5 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC4.3□□□□□ -1.72
NUP35Q8NFH5 AL139135.1-201ENST00000412675 209 ntBASIC4.3□□□□□ -1.72
NUP35Q8NFH5 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NUP35Q8NFH5 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.3□□□□□ -1.72
NUP35Q8NFH5 RPL12P12-201ENST00000424633 501 ntBASIC4.3□□□□□ -1.72
NUP35Q8NFH5 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC4.3□□□□□ -1.72
NUP35Q8NFH5 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NUP35Q8NFH5 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NUP35Q8NFH5 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC4.3□□□□□ -1.72
NUP35Q8NFH5 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.3□□□□□ -1.72
NUP35Q8NFH5 GM2AP2-201ENST00000491764 562 ntBASIC4.3□□□□□ -1.72
NUP35Q8NFH5 AC023424.1-201ENST00000496058 459 ntBASIC4.3□□□□□ -1.72
NUP35Q8NFH5 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.3□□□□□ -1.72
NUP35Q8NFH5 AC021193.1-201ENST00000511607 420 ntBASIC4.3□□□□□ -1.72
NUP35Q8NFH5 RNA5SP434-201ENST00000516647 121 ntBASIC4.3□□□□□ -1.72
NUP35Q8NFH5 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC4.3□□□□□ -1.72
NUP35Q8NFH5 IGLV3-24-201ENST00000517477 197 ntBASIC4.3□□□□□ -1.72
NUP35Q8NFH5 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.3□□□□□ -1.72
NUP35Q8NFH5 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.3□□□□□ -1.72
NUP35Q8NFH5 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC4.3□□□□□ -1.72
NUP35Q8NFH5 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
NUP35Q8NFH5 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NUP35Q8NFH5 AC021269.1-201ENST00000526860 705 ntBASIC4.3□□□□□ -1.72
NUP35Q8NFH5 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC4.3□□□□□ -1.72
NUP35Q8NFH5 AC068993.1-201ENST00000546724 589 ntBASIC4.3□□□□□ -1.72
NUP35Q8NFH5 LSM3P2-201ENST00000551246 273 ntBASIC4.3□□□□□ -1.72
NUP35Q8NFH5 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC4.3□□□□□ -1.72
NUP35Q8NFH5 NMNAT1P5-201ENST00000559657 841 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms