Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC50Q8IVM0 AC005618.4-201ENST00000625053 554 ntBASIC6.2□□□□□ -1.42
CCDC50Q8IVM0 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC50Q8IVM0 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC50Q8IVM0 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC50Q8IVM0 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
CCDC50Q8IVM0 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC50Q8IVM0 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC50Q8IVM0 AC005005.4-201ENST00000623789 16698 ntBASIC6.2□□□□□ -1.42
CCDC50Q8IVM0 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC50Q8IVM0 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CCDC50Q8IVM0 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 AC015689.2-201ENST00000528172 1738 ntBASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 AL031595.2-201ENST00000624215 19071 ntBASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 RNA5SP110-201ENST00000362638 115 ntBASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 RN7SKP108-201ENST00000411367 328 ntBASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 AC010240.2-201ENST00000445363 1205 ntBASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 AC008629.2-201ENST00000503783 483 ntBASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 AC113367.2-201ENST00000505749 160 ntBASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 MAST4-IT1-201ENST00000514241 658 ntBASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 AC007346.1-201ENST00000569208 867 ntBASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 AL080312.2-201ENST00000613001 630 ntBASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 AL357562.1-201ENST00000624911 609 ntBASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 GVINP1-202ENST00000531871 7271 ntBASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 AL603750.1-201ENST00000624216 1717 ntBASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CCDC50Q8IVM0 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 AL162456.1-201ENST00000634535 2006 ntBASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 RPSAP40-201ENST00000442343 891 ntBASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 TRIM60P16-201ENST00000444048 694 ntBASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 KF459542.1-201ENST00000450908 553 ntBASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 RPL38P3-201ENST00000484463 213 ntBASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 AC078899.1-201ENST00000521432 1185 ntBASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 OR7E158P-201ENST00000524483 910 ntBASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 OR4A42P-201ENST00000531397 938 ntBASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 AL359219.2-201ENST00000555184 348 ntBASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 AL078601.3-201ENST00000573303 535 ntBASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 uc_338.29-201ENST00000615099 168 ntBASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 AL355974.3-201ENST00000617383 467 ntBASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 AC073488.6-201ENST00000632293 754 ntBASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 AC099654.15-201ENST00000639802 509 ntBASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 RBMY1HP-201ENST00000382759 1389 ntBASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 AC011933.2-201ENST00000578539 2790 ntBASIC6.18□□□□□ -1.42
CCDC50Q8IVM0 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 AC006484.1-201ENST00000435086 1884 ntBASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 MTND5P12-201ENST00000502851 1449 ntBASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 AL158152.1-201ENST00000602652 1435 ntBASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 AC090220.1-201ENST00000593078 1699 ntBASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC50Q8IVM0 RNA5SP279-201ENST00000365513 117 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms