Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 AC245028.1-201ENST00000423259 256 ntBASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 TPT1P13-201ENST00000449760 499 ntBASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 ACA64.4-201ENST00000459070 127 ntBASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 AC074255.1-201ENST00000511259 501 ntBASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 BNIP3P1-201ENST00000547295 580 ntBASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 AL355974.3-201ENST00000617383 467 ntBASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 AL031651.1-201ENST00000615357 1438 ntBASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 CASC19-281ENST00000642118 1554 ntBASIC9.29□□□□□ -0.92
SNAPC4Q5SXM2 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 SNORA67-201ENST00000384423 137 ntBASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 LDHAP2-201ENST00000437325 985 ntBASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 AC011753.3-201ENST00000443436 406 ntBASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 RN7SL352P-201ENST00000466002 277 ntBASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 AC234771.5-201ENST00000600161 514 ntBASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 AC069307.1-201ENST00000602820 447 ntBASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 AC027334.1-201ENST00000603257 310 ntBASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 AL353763.1-201ENST00000624467 1628 ntBASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 RNU1-43P-201ENST00000365052 165 ntBASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 RNU4-2-201ENST00000365668 141 ntBASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 RPL23AP18-201ENST00000416139 468 ntBASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 AC091153.1-201ENST00000466297 402 ntBASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 AC126615.2-201ENST00000553003 515 ntBASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 AC127381.1-201ENST00000555979 939 ntBASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 AC008745.1-201ENST00000604064 271 ntBASIC9.28□□□□□ -0.92
SNAPC4Q5SXM2 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
SNAPC4Q5SXM2 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SNAPC4Q5SXM2 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC9.27□□□□□ -0.93
SNAPC4Q5SXM2 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC9.27□□□□□ -0.93
SNAPC4Q5SXM2 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
SNAPC4Q5SXM2 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC9.27□□□□□ -0.93
SNAPC4Q5SXM2 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
SNAPC4Q5SXM2 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC9.27□□□□□ -0.93
SNAPC4Q5SXM2 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SNAPC4Q5SXM2 AL162739.1-201ENST00000450606 307 ntBASIC9.27□□□□□ -0.93
SNAPC4Q5SXM2 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC9.27□□□□□ -0.93
SNAPC4Q5SXM2 AL022319.1-201ENST00000458183 1167 ntBASIC9.27□□□□□ -0.93
SNAPC4Q5SXM2 RN7SL459P-201ENST00000481078 302 ntBASIC9.27□□□□□ -0.93
SNAPC4Q5SXM2 AC105384.2-201ENST00000508433 640 ntBASIC9.27□□□□□ -0.93
SNAPC4Q5SXM2 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC9.27□□□□□ -0.93
SNAPC4Q5SXM2 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC9.27□□□□□ -0.93
SNAPC4Q5SXM2 MIR3934-201ENST00000579806 107 ntBASIC9.27□□□□□ -0.93
SNAPC4Q5SXM2 AC109583.2-201ENST00000617367 129 ntBASIC9.27□□□□□ -0.93
SNAPC4Q5SXM2 MIR7703-201ENST00000620784 77 ntBASIC9.27□□□□□ -0.93
SNAPC4Q5SXM2 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms