Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AL390879.1-201ENST00000439143 386 ntBASIC5.01□□□□□ -1.61
CX3CL1P78423 AC007000.2-201ENST00000442564 487 ntBASIC5.01□□□□□ -1.61
CX3CL1P78423 AC245517.2-201ENST00000442890 346 ntBASIC5.01□□□□□ -1.61
CX3CL1P78423 OR13K1P-201ENST00000444577 975 ntBASIC5.01□□□□□ -1.61
CX3CL1P78423 KF459542.1-201ENST00000450908 553 ntBASIC5.01□□□□□ -1.61
CX3CL1P78423 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.01□□□□□ -1.61
CX3CL1P78423 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.01□□□□□ -1.61
CX3CL1P78423 RN7SL369P-201ENST00000477138 299 ntBASIC5.01□□□□□ -1.61
CX3CL1P78423 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.01□□□□□ -1.61
CX3CL1P78423 CR383656.1-201ENST00000484916 377 ntBASIC5.01□□□□□ -1.61
CX3CL1P78423 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.01□□□□□ -1.61
CX3CL1P78423 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.01□□□□□ -1.61
CX3CL1P78423 MTCO1P31-201ENST00000506355 492 ntBASIC5.01□□□□□ -1.61
CX3CL1P78423 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.01□□□□□ -1.61
CX3CL1P78423 AC106806.2-201ENST00000509365 500 ntBASIC5.01□□□□□ -1.61
CX3CL1P78423 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.01□□□□□ -1.61
CX3CL1P78423 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.01□□□□□ -1.61
CX3CL1P78423 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.01□□□□□ -1.61
CX3CL1P78423 HMGB1P46-201ENST00000520062 610 ntBASIC5.01□□□□□ -1.61
CX3CL1P78423 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.01□□□□□ -1.61
CX3CL1P78423 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CX3CL1P78423 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CX3CL1P78423 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.01□□□□□ -1.61
CX3CL1P78423 CR383656.14-201ENST00000551951 406 ntBASIC5.01□□□□□ -1.61
CX3CL1P78423 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.01□□□□□ -1.61
CX3CL1P78423 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.01□□□□□ -1.61
CX3CL1P78423 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.01□□□□□ -1.61
CX3CL1P78423 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.01□□□□□ -1.61
CX3CL1P78423 NDUFB9P1-201ENST00000604683 510 ntBASIC5.01□□□□□ -1.61
CX3CL1P78423 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.01□□□□□ -1.61
CX3CL1P78423 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.01□□□□□ -1.61
CX3CL1P78423 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.01□□□□□ -1.61
CX3CL1P78423 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.01□□□□□ -1.61
CX3CL1P78423 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.01□□□□□ -1.61
CX3CL1P78423 HTR1DP1-201ENST00000616500 888 ntBASIC5.01□□□□□ -1.61
CX3CL1P78423 AC025016.1-201ENST00000616746 682 ntBASIC5.01□□□□□ -1.61
CX3CL1P78423 AC021766.1-201ENST00000624404 741 ntBASIC5.01□□□□□ -1.61
CX3CL1P78423 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.01□□□□□ -1.61
CX3CL1P78423 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CX3CL1P78423 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CX3CL1P78423 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
CX3CL1P78423 AC017002.4-201ENST00000604721 1525 ntBASIC5.01□□□□□ -1.61
CX3CL1P78423 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CX3CL1P78423 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CX3CL1P78423 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.01□□□□□ -1.61
CX3CL1P78423 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CX3CL1P78423 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CX3CL1P78423 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.01□□□□□ -1.61
CX3CL1P78423 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
CX3CL1P78423 CASC19-246ENST00000641625 1606 ntBASIC5.01□□□□□ -1.61
CX3CL1P78423 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CX3CL1P78423 AC092070.2-203ENST00000598377 3644 ntBASIC5.01□□□□□ -1.61
CX3CL1P78423 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CX3CL1P78423 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5□□□□□ -1.61
CX3CL1P78423 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5□□□□□ -1.61
CX3CL1P78423 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5□□□□□ -1.61
CX3CL1P78423 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5□□□□□ -1.61
CX3CL1P78423 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
CX3CL1P78423 OFD1P8Y-201ENST00000449148 1433 ntBASIC5□□□□□ -1.61
CX3CL1P78423 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CX3CL1P78423 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5□□□□□ -1.61
CX3CL1P78423 RPL11P4-201ENST00000332269 436 ntBASIC5□□□□□ -1.61
CX3CL1P78423 PSMA6P1-201ENST00000400275 741 ntBASIC5□□□□□ -1.61
CX3CL1P78423 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5□□□□□ -1.61
CX3CL1P78423 RN7SKP146-201ENST00000410242 334 ntBASIC5□□□□□ -1.61
CX3CL1P78423 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5□□□□□ -1.61
CX3CL1P78423 RANP4-201ENST00000413361 655 ntBASIC5□□□□□ -1.61
CX3CL1P78423 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5□□□□□ -1.61
CX3CL1P78423 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5□□□□□ -1.61
CX3CL1P78423 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5□□□□□ -1.61
CX3CL1P78423 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5□□□□□ -1.61
CX3CL1P78423 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5□□□□□ -1.61
CX3CL1P78423 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5□□□□□ -1.61
CX3CL1P78423 POU5F1P5-201ENST00000445059 658 ntBASIC5□□□□□ -1.61
CX3CL1P78423 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5□□□□□ -1.61
CX3CL1P78423 MORF4-201ENST00000447135 971 ntBASIC5□□□□□ -1.61
CX3CL1P78423 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5□□□□□ -1.61
CX3CL1P78423 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5□□□□□ -1.61
CX3CL1P78423 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5□□□□□ -1.61
CX3CL1P78423 AC073476.1-201ENST00000452854 407 ntBASIC5□□□□□ -1.61
CX3CL1P78423 AC239798.3-201ENST00000454459 408 ntBASIC5□□□□□ -1.61
CX3CL1P78423 MTND2P39-201ENST00000457230 764 ntBASIC5□□□□□ -1.61
CX3CL1P78423 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5□□□□□ -1.61
CX3CL1P78423 CABYRP1-201ENST00000465493 1045 ntBASIC5□□□□□ -1.61
CX3CL1P78423 AL355032.1-201ENST00000472981 438 ntBASIC5□□□□□ -1.61
CX3CL1P78423 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5□□□□□ -1.61
CX3CL1P78423 RN7SL326P-201ENST00000477493 296 ntBASIC5□□□□□ -1.61
CX3CL1P78423 AC098583.1-201ENST00000480875 255 ntBASIC5□□□□□ -1.61
CX3CL1P78423 AC093663.2-201ENST00000484625 313 ntBASIC5□□□□□ -1.61
CX3CL1P78423 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5□□□□□ -1.61
CX3CL1P78423 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5□□□□□ -1.61
CX3CL1P78423 AC112206.4-201ENST00000515142 405 ntBASIC5□□□□□ -1.61
CX3CL1P78423 RN7SKP34-201ENST00000516142 244 ntBASIC5□□□□□ -1.61
CX3CL1P78423 SNORA74.1-201ENST00000516320 180 ntBASIC5□□□□□ -1.61
CX3CL1P78423 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5□□□□□ -1.61
CX3CL1P78423 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5□□□□□ -1.61
CX3CL1P78423 IGHV7-34-1-201ENST00000519200 350 ntBASIC5□□□□□ -1.61
CX3CL1P78423 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5□□□□□ -1.61
CX3CL1P78423 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5□□□□□ -1.61
CX3CL1P78423 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms