Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.19□□□□□ -1.58
VBP1P61758 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.19□□□□□ -1.58
VBP1P61758 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.19□□□□□ -1.58
VBP1P61758 AC026367.3-201ENST00000619032 590 ntBASIC5.19□□□□□ -1.58
VBP1P61758 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.19□□□□□ -1.58
VBP1P61758 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.19□□□□□ -1.58
VBP1P61758 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.19□□□□□ -1.58
VBP1P61758 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
VBP1P61758 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VBP1P61758 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
VBP1P61758 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VBP1P61758 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VBP1P61758 AP004607.3-201ENST00000530354 3915 ntBASIC5.18□□□□□ -1.58
VBP1P61758 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VBP1P61758 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
VBP1P61758 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.18□□□□□ -1.58
VBP1P61758 AL606537.1-201ENST00000607258 2011 ntBASIC5.18□□□□□ -1.58
VBP1P61758 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VBP1P61758 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.18□□□□□ -1.58
VBP1P61758 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VBP1P61758 RNA5SP346-201ENST00000363541 121 ntBASIC5.18□□□□□ -1.58
VBP1P61758 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VBP1P61758 KRT18P53-201ENST00000431919 117 ntBASIC5.18□□□□□ -1.58
VBP1P61758 TCEA1P3-201ENST00000443005 880 ntBASIC5.18□□□□□ -1.58
VBP1P61758 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VBP1P61758 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.18□□□□□ -1.58
VBP1P61758 MTND6P5-201ENST00000448266 512 ntBASIC5.18□□□□□ -1.58
VBP1P61758 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC5.18□□□□□ -1.58
VBP1P61758 AL133351.3-201ENST00000454998 193 ntBASIC5.18□□□□□ -1.58
VBP1P61758 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.18□□□□□ -1.58
VBP1P61758 RPL12P31-201ENST00000478433 450 ntBASIC5.18□□□□□ -1.58
VBP1P61758 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.18□□□□□ -1.58
VBP1P61758 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.18□□□□□ -1.58
VBP1P61758 OR56A7P-201ENST00000524865 941 ntBASIC5.18□□□□□ -1.58
VBP1P61758 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.18□□□□□ -1.58
VBP1P61758 PRR13P3-201ENST00000603578 376 ntBASIC5.18□□□□□ -1.58
VBP1P61758 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
VBP1P61758 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.18□□□□□ -1.58
VBP1P61758 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
VBP1P61758 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VBP1P61758 THAP12P5-201ENST00000405864 2275 ntBASIC5.18□□□□□ -1.58
VBP1P61758 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.18□□□□□ -1.58
VBP1P61758 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
VBP1P61758 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VBP1P61758 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
VBP1P61758 AC093775.1-201ENST00000624154 1868 ntBASIC5.17□□□□□ -1.58
VBP1P61758 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
VBP1P61758 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.17□□□□□ -1.58
VBP1P61758 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VBP1P61758 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VBP1P61758 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VBP1P61758 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.17□□□□□ -1.58
VBP1P61758 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
VBP1P61758 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
VBP1P61758 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VBP1P61758 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VBP1P61758 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VBP1P61758 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.17□□□□□ -1.58
VBP1P61758 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
VBP1P61758 RN7SKP191-201ENST00000364713 306 ntBASIC5.17□□□□□ -1.58
VBP1P61758 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.17□□□□□ -1.58
VBP1P61758 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
VBP1P61758 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
VBP1P61758 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
VBP1P61758 AL096829.1-201ENST00000413677 457 ntBASIC5.17□□□□□ -1.58
VBP1P61758 AC112492.2-201ENST00000432774 1030 ntBASIC5.17□□□□□ -1.58
VBP1P61758 TMX2P1-201ENST00000436507 708 ntBASIC5.17□□□□□ -1.58
VBP1P61758 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.17□□□□□ -1.58
VBP1P61758 COL11A2P1-205ENST00000441798 676 ntBASIC5.17□□□□□ -1.58
VBP1P61758 LINC02210-201ENST00000444561 288 ntBASIC5.17□□□□□ -1.58
VBP1P61758 AKR1D1P1-201ENST00000457236 936 ntBASIC5.17□□□□□ -1.58
VBP1P61758 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.17□□□□□ -1.58
VBP1P61758 AC104164.1-201ENST00000460282 590 ntBASIC5.17□□□□□ -1.58
VBP1P61758 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC5.17□□□□□ -1.58
VBP1P61758 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.17□□□□□ -1.58
VBP1P61758 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.17□□□□□ -1.58
VBP1P61758 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC5.17□□□□□ -1.58
VBP1P61758 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.17□□□□□ -1.58
VBP1P61758 AC137627.1-201ENST00000545761 289 ntBASIC5.17□□□□□ -1.58
VBP1P61758 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.17□□□□□ -1.58
VBP1P61758 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.17□□□□□ -1.58
VBP1P61758 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC5.17□□□□□ -1.58
VBP1P61758 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.17□□□□□ -1.58
VBP1P61758 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.17□□□□□ -1.58
VBP1P61758 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC5.17□□□□□ -1.58
VBP1P61758 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC5.17□□□□□ -1.58
VBP1P61758 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.17□□□□□ -1.58
VBP1P61758 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC5.17□□□□□ -1.58
VBP1P61758 AL445670.1-201ENST00000618889 801 ntBASIC5.17□□□□□ -1.58
VBP1P61758 AL035661.1-201ENST00000620459 1144 ntBASIC5.17□□□□□ -1.58
VBP1P61758 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.17□□□□□ -1.58
VBP1P61758 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC5.17□□□□□ -1.58
VBP1P61758 AC011755.1-201ENST00000623763 2049 ntBASIC5.17□□□□□ -1.58
VBP1P61758 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
VBP1P61758 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
VBP1P61758 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VBP1P61758 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
VBP1P61758 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.16□□□□□ -1.58
VBP1P61758 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VBP1P61758 AC006206.1-201ENST00000544842 3387 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms