Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.6□□□□□ -1.51
CLDN20P56880 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CLDN20P56880 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN20P56880 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN20P56880 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CLDN20P56880 AC006600.2-201ENST00000624834 2506 ntBASIC5.59□□□□□ -1.51
CLDN20P56880 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.59□□□□□ -1.51
CLDN20P56880 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN20P56880 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.59□□□□□ -1.51
CLDN20P56880 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN20P56880 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN20P56880 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN20P56880 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.59□□□□□ -1.51
CLDN20P56880 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.59□□□□□ -1.51
CLDN20P56880 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
CLDN20P56880 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN20P56880 AP001541.1-201ENST00000623322 1904 ntBASIC5.59□□□□□ -1.51
CLDN20P56880 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN20P56880 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
CLDN20P56880 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.59□□□□□ -1.51
CLDN20P56880 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CLDN20P56880 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.59□□□□□ -1.51
CLDN20P56880 RCC2P2-201ENST00000422174 918 ntBASIC5.59□□□□□ -1.51
CLDN20P56880 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.51
CLDN20P56880 AK3P5-201ENST00000432033 519 ntBASIC5.59□□□□□ -1.51
CLDN20P56880 IGLV3-4-201ENST00000432300 244 ntBASIC5.59□□□□□ -1.51
CLDN20P56880 AL365220.1-201ENST00000432923 399 ntBASIC5.59□□□□□ -1.51
CLDN20P56880 AC007679.3-201ENST00000434035 414 ntBASIC5.59□□□□□ -1.51
CLDN20P56880 AC016908.1-201ENST00000442571 1219 ntBASIC5.59□□□□□ -1.51
CLDN20P56880 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN20P56880 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.59□□□□□ -1.51
CLDN20P56880 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN20P56880 RNU6-1334P-201ENST00000516032 105 ntBASIC5.59□□□□□ -1.51
CLDN20P56880 AC008429.4-201ENST00000521201 182 ntBASIC5.59□□□□□ -1.51
CLDN20P56880 AC136777.2-201ENST00000522979 358 ntBASIC5.59□□□□□ -1.51
CLDN20P56880 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN20P56880 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN20P56880 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.59□□□□□ -1.51
CLDN20P56880 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.59□□□□□ -1.51
CLDN20P56880 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.59□□□□□ -1.51
CLDN20P56880 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.59□□□□□ -1.51
CLDN20P56880 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN20P56880 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN20P56880 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN20P56880 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.59□□□□□ -1.51
CLDN20P56880 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.59□□□□□ -1.51
CLDN20P56880 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.59□□□□□ -1.51
CLDN20P56880 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN20P56880 DYNLL1P1-201ENST00000595442 269 ntBASIC5.59□□□□□ -1.51
CLDN20P56880 AP001823.1-201ENST00000604056 1003 ntBASIC5.59□□□□□ -1.51
CLDN20P56880 AL356752.1-201ENST00000615844 593 ntBASIC5.59□□□□□ -1.51
CLDN20P56880 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
CLDN20P56880 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN20P56880 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.59□□□□□ -1.51
CLDN20P56880 AC022726.2-201ENST00000634673 547 ntBASIC5.59□□□□□ -1.51
CLDN20P56880 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.51
CLDN20P56880 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.59□□□□□ -1.51
CLDN20P56880 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.59□□□□□ -1.51
CLDN20P56880 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.59□□□□□ -1.51
CLDN20P56880 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN20P56880 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CLDN20P56880 AL731532.1-201ENST00000623972 4236 ntBASIC5.59□□□□□ -1.51
CLDN20P56880 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN20P56880 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN20P56880 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
CLDN20P56880 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CLDN20P56880 AOX3P-204ENST00000491025 2107 ntBASIC5.59□□□□□ -1.52
CLDN20P56880 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CLDN20P56880 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CLDN20P56880 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.58□□□□□ -1.52
CLDN20P56880 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CLDN20P56880 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN20P56880 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.58□□□□□ -1.52
CLDN20P56880 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN20P56880 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN20P56880 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN20P56880 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN20P56880 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.58□□□□□ -1.52
CLDN20P56880 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CLDN20P56880 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.58□□□□□ -1.52
CLDN20P56880 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CLDN20P56880 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN20P56880 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN20P56880 MIR133A2-201ENST00000347538 102 ntBASIC5.58□□□□□ -1.52
CLDN20P56880 RNU6-618P-201ENST00000363518 112 ntBASIC5.58□□□□□ -1.52
CLDN20P56880 SNORA43.1-201ENST00000364863 140 ntBASIC5.58□□□□□ -1.52
CLDN20P56880 RNU11-6P-201ENST00000391127 133 ntBASIC5.58□□□□□ -1.52
CLDN20P56880 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN20P56880 OOSP1-201ENST00000398992 1270 ntBASIC5.58□□□□□ -1.52
CLDN20P56880 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN20P56880 AKR1B10P1-201ENST00000425765 942 ntBASIC5.58□□□□□ -1.52
CLDN20P56880 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.58□□□□□ -1.52
CLDN20P56880 SEPT14P12-201ENST00000442280 560 ntBASIC5.58□□□□□ -1.52
CLDN20P56880 RPS15AP29-201ENST00000445539 400 ntBASIC5.58□□□□□ -1.52
CLDN20P56880 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.58□□□□□ -1.52
CLDN20P56880 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.58□□□□□ -1.52
CLDN20P56880 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN20P56880 RN7SL221P-201ENST00000466190 281 ntBASIC5.58□□□□□ -1.52
CLDN20P56880 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.58□□□□□ -1.52
CLDN20P56880 RNA5SP400-201ENST00000517155 111 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms