Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RPS27P18-201ENST00000431701 247 ntBASIC6.49□□□□□ -1.37
VCPP55072 AL590399.4-201ENST00000436561 601 ntBASIC6.49□□□□□ -1.37
VCPP55072 NDUFS5P5-201ENST00000437256 321 ntBASIC6.49□□□□□ -1.37
VCPP55072 SUMO2P3-201ENST00000438311 288 ntBASIC6.49□□□□□ -1.37
VCPP55072 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
VCPP55072 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.49□□□□□ -1.37
VCPP55072 RPL7L1P3-201ENST00000455249 689 ntBASIC6.49□□□□□ -1.37
VCPP55072 RPL34P33-201ENST00000486062 334 ntBASIC6.49□□□□□ -1.37
VCPP55072 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.49□□□□□ -1.37
VCPP55072 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.49□□□□□ -1.37
VCPP55072 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.49□□□□□ -1.37
VCPP55072 RPA2P3-201ENST00000533268 770 ntBASIC6.49□□□□□ -1.37
VCPP55072 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.49□□□□□ -1.37
VCPP55072 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.49□□□□□ -1.37
VCPP55072 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.49□□□□□ -1.37
VCPP55072 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.49□□□□□ -1.37
VCPP55072 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.49□□□□□ -1.37
VCPP55072 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.49□□□□□ -1.37
VCPP55072 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.49□□□□□ -1.37
VCPP55072 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.49□□□□□ -1.37
VCPP55072 AL589674.2-201ENST00000604304 337 ntBASIC6.49□□□□□ -1.37
VCPP55072 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.49□□□□□ -1.37
VCPP55072 AL035661.1-201ENST00000620459 1144 ntBASIC6.49□□□□□ -1.37
VCPP55072 AC003992.1-201ENST00000635364 557 ntBASIC6.49□□□□□ -1.37
VCPP55072 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
VCPP55072 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
VCPP55072 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
VCPP55072 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
VCPP55072 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
VCPP55072 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
VCPP55072 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.49□□□□□ -1.37
VCPP55072 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.49□□□□□ -1.37
VCPP55072 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.49□□□□□ -1.37
VCPP55072 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.49□□□□□ -1.37
VCPP55072 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
VCPP55072 CCNT2P1-201ENST00000423082 1315 ntBASIC6.49□□□□□ -1.37
VCPP55072 CR383656.5-201ENST00000547616 1340 ntBASIC6.49□□□□□ -1.37
VCPP55072 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
VCPP55072 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
VCPP55072 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
VCPP55072 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
VCPP55072 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
VCPP55072 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.48□□□□□ -1.37
VCPP55072 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
VCPP55072 AC005725.1-201ENST00000577346 2607 ntBASIC6.48□□□□□ -1.37
VCPP55072 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
VCPP55072 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.48□□□□□ -1.37
VCPP55072 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
VCPP55072 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
VCPP55072 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.48□□□□□ -1.37
VCPP55072 RN7SKP77-201ENST00000363261 353 ntBASIC6.48□□□□□ -1.37
VCPP55072 RNU1-59P-201ENST00000364829 162 ntBASIC6.48□□□□□ -1.37
VCPP55072 SNORA70-201ENST00000384436 135 ntBASIC6.48□□□□□ -1.37
VCPP55072 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.48□□□□□ -1.37
VCPP55072 MIR1203-201ENST00000408812 85 ntBASIC6.48□□□□□ -1.37
VCPP55072 RN7SKP151-201ENST00000410230 316 ntBASIC6.48□□□□□ -1.37
VCPP55072 SDHDP6-201ENST00000414693 480 ntBASIC6.48□□□□□ -1.37
VCPP55072 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.48□□□□□ -1.37
VCPP55072 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.48□□□□□ -1.37
VCPP55072 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.48□□□□□ -1.37
VCPP55072 PCBP2P1-201ENST00000437262 977 ntBASIC6.48□□□□□ -1.37
VCPP55072 ELOCP3-201ENST00000439303 348 ntBASIC6.48□□□□□ -1.37
VCPP55072 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.48□□□□□ -1.37
VCPP55072 AL445665.1-202ENST00000452436 324 ntBASIC6.48□□□□□ -1.37
VCPP55072 AL355032.1-201ENST00000472981 438 ntBASIC6.48□□□□□ -1.37
VCPP55072 RN7SL826P-201ENST00000479724 288 ntBASIC6.48□□□□□ -1.37
VCPP55072 AC231760.1-201ENST00000498002 260 ntBASIC6.48□□□□□ -1.37
VCPP55072 AC010343.2-201ENST00000510162 224 ntBASIC6.48□□□□□ -1.37
VCPP55072 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.48□□□□□ -1.37
VCPP55072 LDHBP3-201ENST00000514909 822 ntBASIC6.48□□□□□ -1.37
VCPP55072 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.48□□□□□ -1.37
VCPP55072 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.48□□□□□ -1.37
VCPP55072 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.48□□□□□ -1.37
VCPP55072 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.48□□□□□ -1.37
VCPP55072 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.48□□□□□ -1.37
VCPP55072 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.48□□□□□ -1.37
VCPP55072 U1.25-201ENST00000614085 162 ntBASIC6.48□□□□□ -1.37
VCPP55072 U1.34-201ENST00000618578 162 ntBASIC6.48□□□□□ -1.37
VCPP55072 U1.31-201ENST00000620022 160 ntBASIC6.48□□□□□ -1.37
VCPP55072 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.48□□□□□ -1.37
VCPP55072 AC069542.2-201ENST00000624816 216 ntBASIC6.48□□□□□ -1.37
VCPP55072 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
VCPP55072 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
VCPP55072 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.48□□□□□ -1.37
VCPP55072 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
VCPP55072 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.48□□□□□ -1.37
VCPP55072 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.48□□□□□ -1.37
VCPP55072 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.48□□□□□ -1.37
VCPP55072 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
VCPP55072 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
VCPP55072 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
VCPP55072 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.48□□□□□ -1.37
VCPP55072 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
VCPP55072 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
VCPP55072 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
VCPP55072 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
VCPP55072 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
VCPP55072 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
VCPP55072 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.47□□□□□ -1.37
VCPP55072 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms