Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.71□□□□□ -1.34
HMGCS2P54868 RN7SKP288-201ENST00000516227 268 ntBASIC6.71□□□□□ -1.34
HMGCS2P54868 MIR2117-201ENST00000516780 80 ntBASIC6.71□□□□□ -1.34
HMGCS2P54868 NRBF2P4-201ENST00000520874 850 ntBASIC6.71□□□□□ -1.34
HMGCS2P54868 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.71□□□□□ -1.34
HMGCS2P54868 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.71□□□□□ -1.34
HMGCS2P54868 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.71□□□□□ -1.34
HMGCS2P54868 SUGT1P3-202ENST00000604259 383 ntBASIC6.71□□□□□ -1.34
HMGCS2P54868 AC010245.2-201ENST00000606908 1167 ntBASIC6.71□□□□□ -1.34
HMGCS2P54868 CASC19-264ENST00000641912 1184 ntBASIC6.71□□□□□ -1.34
HMGCS2P54868 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HMGCS2P54868 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.71□□□□□ -1.34
HMGCS2P54868 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
HMGCS2P54868 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.71□□□□□ -1.34
HMGCS2P54868 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HMGCS2P54868 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.71□□□□□ -1.34
HMGCS2P54868 CR383656.5-201ENST00000547616 1340 ntBASIC6.71□□□□□ -1.34
HMGCS2P54868 PABPC1P6-201ENST00000445594 1829 ntBASIC6.71□□□□□ -1.34
HMGCS2P54868 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HMGCS2P54868 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
HMGCS2P54868 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.7□□□□□ -1.34
HMGCS2P54868 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
HMGCS2P54868 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
HMGCS2P54868 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
HMGCS2P54868 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HMGCS2P54868 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
HMGCS2P54868 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.7□□□□□ -1.34
HMGCS2P54868 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.7□□□□□ -1.34
HMGCS2P54868 AK3P5-201ENST00000432033 519 ntBASIC6.7□□□□□ -1.34
HMGCS2P54868 GAPDHP58-201ENST00000438477 1006 ntBASIC6.7□□□□□ -1.34
HMGCS2P54868 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.7□□□□□ -1.34
HMGCS2P54868 RPL7L1P3-201ENST00000455249 689 ntBASIC6.7□□□□□ -1.34
HMGCS2P54868 AC008953.1-201ENST00000497334 318 ntBASIC6.7□□□□□ -1.34
HMGCS2P54868 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.7□□□□□ -1.34
HMGCS2P54868 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.7□□□□□ -1.34
HMGCS2P54868 CYP4F27P-201ENST00000514557 494 ntBASIC6.7□□□□□ -1.34
HMGCS2P54868 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.7□□□□□ -1.34
HMGCS2P54868 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.7□□□□□ -1.34
HMGCS2P54868 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.7□□□□□ -1.34
HMGCS2P54868 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.7□□□□□ -1.34
HMGCS2P54868 AC096996.1-201ENST00000563813 325 ntBASIC6.7□□□□□ -1.34
HMGCS2P54868 AC004890.3-201ENST00000605566 1095 ntBASIC6.7□□□□□ -1.34
HMGCS2P54868 AC008115.4-201ENST00000619780 775 ntBASIC6.7□□□□□ -1.34
HMGCS2P54868 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.7□□□□□ -1.34
HMGCS2P54868 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HMGCS2P54868 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.7□□□□□ -1.34
HMGCS2P54868 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HMGCS2P54868 AC061975.7-201ENST00000592016 2692 ntBASIC6.7□□□□□ -1.34
HMGCS2P54868 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
HMGCS2P54868 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
HMGCS2P54868 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HMGCS2P54868 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HMGCS2P54868 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
HMGCS2P54868 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.69□□□□□ -1.34
HMGCS2P54868 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.69□□□□□ -1.34
HMGCS2P54868 AL353763.1-201ENST00000624467 1628 ntBASIC6.69□□□□□ -1.34
HMGCS2P54868 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
HMGCS2P54868 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
HMGCS2P54868 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
HMGCS2P54868 AC009804.1-201ENST00000400949 179 ntBASIC6.69□□□□□ -1.34
HMGCS2P54868 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.69□□□□□ -1.34
HMGCS2P54868 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.69□□□□□ -1.34
HMGCS2P54868 AC019205.1-201ENST00000421830 730 ntBASIC6.69□□□□□ -1.34
HMGCS2P54868 AL731534.1-201ENST00000434711 269 ntBASIC6.69□□□□□ -1.34
HMGCS2P54868 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.69□□□□□ -1.34
HMGCS2P54868 FABP5P2-201ENST00000439042 408 ntBASIC6.69□□□□□ -1.34
HMGCS2P54868 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.69□□□□□ -1.34
HMGCS2P54868 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.69□□□□□ -1.34
HMGCS2P54868 AP000547.1-201ENST00000454360 617 ntBASIC6.69□□□□□ -1.34
HMGCS2P54868 RN7SL30P-201ENST00000488416 306 ntBASIC6.69□□□□□ -1.34
HMGCS2P54868 AC093763.2-201ENST00000505334 1223 ntBASIC6.69□□□□□ -1.34
HMGCS2P54868 AP006245.2-201ENST00000522004 300 ntBASIC6.69□□□□□ -1.34
HMGCS2P54868 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.69□□□□□ -1.34
HMGCS2P54868 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.69□□□□□ -1.34
HMGCS2P54868 MRPS21P7-201ENST00000566937 238 ntBASIC6.69□□□□□ -1.34
HMGCS2P54868 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.69□□□□□ -1.34
HMGCS2P54868 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.69□□□□□ -1.34
HMGCS2P54868 AC005229.3-201ENST00000603438 323 ntBASIC6.69□□□□□ -1.34
HMGCS2P54868 AC118658.2-201ENST00000618697 459 ntBASIC6.69□□□□□ -1.34
HMGCS2P54868 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.69□□□□□ -1.34
HMGCS2P54868 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.69□□□□□ -1.34
HMGCS2P54868 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
HMGCS2P54868 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HMGCS2P54868 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HMGCS2P54868 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.69□□□□□ -1.34
HMGCS2P54868 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HMGCS2P54868 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
HMGCS2P54868 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.69□□□□□ -1.34
HMGCS2P54868 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HMGCS2P54868 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.69□□□□□ -1.34
HMGCS2P54868 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HMGCS2P54868 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
HMGCS2P54868 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
HMGCS2P54868 OLMALINC-203ENST00000641087 3779 ntBASIC6.68□□□□□ -1.34
HMGCS2P54868 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HMGCS2P54868 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
HMGCS2P54868 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HMGCS2P54868 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.68□□□□□ -1.34
HMGCS2P54868 AL592429.1-201ENST00000403909 1473 ntBASIC6.68□□□□□ -1.34
HMGCS2P54868 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms