Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.54□□□□□ -1.36
NEK3P51956 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.54□□□□□ -1.36
NEK3P51956 AC093014.1-201ENST00000548926 724 ntBASIC6.54□□□□□ -1.36
NEK3P51956 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.54□□□□□ -1.36
NEK3P51956 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.54□□□□□ -1.36
NEK3P51956 MIR3154-201ENST00000577829 84 ntBASIC6.54□□□□□ -1.36
NEK3P51956 AC034236.3-201ENST00000605999 461 ntBASIC6.54□□□□□ -1.36
NEK3P51956 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.54□□□□□ -1.36
NEK3P51956 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
NEK3P51956 MIR6806-201ENST00000622141 64 ntBASIC6.54□□□□□ -1.36
NEK3P51956 AC090617.9-201ENST00000623751 147 ntBASIC6.54□□□□□ -1.36
NEK3P51956 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NEK3P51956 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
NEK3P51956 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.54□□□□□ -1.36
NEK3P51956 AC105235.1-201ENST00000623208 1816 ntBASIC6.54□□□□□ -1.36
NEK3P51956 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NEK3P51956 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
NEK3P51956 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NEK3P51956 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
NEK3P51956 AC027575.3-201ENST00000583058 2747 ntBASIC6.54□□□□□ -1.36
NEK3P51956 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.54□□□□□ -1.36
NEK3P51956 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.54□□□□□ -1.36
NEK3P51956 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NEK3P51956 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.54□□□□□ -1.36
NEK3P51956 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NEK3P51956 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
NEK3P51956 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NEK3P51956 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.53□□□□□ -1.36
NEK3P51956 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.53□□□□□ -1.36
NEK3P51956 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NEK3P51956 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NEK3P51956 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NEK3P51956 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.53□□□□□ -1.36
NEK3P51956 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NEK3P51956 AC011369.2-201ENST00000624423 1567 ntBASIC6.53□□□□□ -1.36
NEK3P51956 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.53□□□□□ -1.36
NEK3P51956 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NEK3P51956 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
NEK3P51956 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.53□□□□□ -1.36
NEK3P51956 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NEK3P51956 RN7SKP237-201ENST00000364663 301 ntBASIC6.53□□□□□ -1.36
NEK3P51956 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.53□□□□□ -1.36
NEK3P51956 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NEK3P51956 AL360271.1-201ENST00000395679 510 ntBASIC6.53□□□□□ -1.36
NEK3P51956 OOSP1-201ENST00000398992 1270 ntBASIC6.53□□□□□ -1.36
NEK3P51956 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.53□□□□□ -1.36
NEK3P51956 ARL2BPP3-201ENST00000421226 480 ntBASIC6.53□□□□□ -1.36
NEK3P51956 RPL23AP85-201ENST00000421838 433 ntBASIC6.53□□□□□ -1.36
NEK3P51956 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC6.53□□□□□ -1.36
NEK3P51956 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.53□□□□□ -1.36
NEK3P51956 RPL23AP4-201ENST00000427757 463 ntBASIC6.53□□□□□ -1.36
NEK3P51956 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6.53□□□□□ -1.36
NEK3P51956 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NEK3P51956 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.53□□□□□ -1.36
NEK3P51956 RPL23AP23-201ENST00000452590 471 ntBASIC6.53□□□□□ -1.36
NEK3P51956 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.53□□□□□ -1.36
NEK3P51956 AC079080.1-201ENST00000479841 822 ntBASIC6.53□□□□□ -1.36
NEK3P51956 AC104629.1-201ENST00000494226 508 ntBASIC6.53□□□□□ -1.36
NEK3P51956 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.53□□□□□ -1.36
NEK3P51956 AC122718.2-201ENST00000505325 591 ntBASIC6.53□□□□□ -1.36
NEK3P51956 BTG4P1-201ENST00000510421 183 ntBASIC6.53□□□□□ -1.36
NEK3P51956 RNU6-1102P-201ENST00000516149 96 ntBASIC6.53□□□□□ -1.36
NEK3P51956 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.53□□□□□ -1.36
NEK3P51956 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.53□□□□□ -1.36
NEK3P51956 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC6.53□□□□□ -1.36
NEK3P51956 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6.53□□□□□ -1.36
NEK3P51956 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
NEK3P51956 C1GALT1P1-201ENST00000548895 1089 ntBASIC6.53□□□□□ -1.36
NEK3P51956 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.53□□□□□ -1.36
NEK3P51956 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC6.53□□□□□ -1.36
NEK3P51956 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC6.53□□□□□ -1.36
NEK3P51956 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC6.53□□□□□ -1.36
NEK3P51956 AL589863.1-201ENST00000595383 631 ntBASIC6.53□□□□□ -1.36
NEK3P51956 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.53□□□□□ -1.36
NEK3P51956 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.53□□□□□ -1.36
NEK3P51956 BNIP3P19-201ENST00000605397 577 ntBASIC6.53□□□□□ -1.36
NEK3P51956 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.53□□□□□ -1.36
NEK3P51956 AL135786.2-201ENST00000608422 615 ntBASIC6.53□□□□□ -1.36
NEK3P51956 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NEK3P51956 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.53□□□□□ -1.36
NEK3P51956 AC009120.7-201ENST00000623452 780 ntBASIC6.53□□□□□ -1.36
NEK3P51956 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.53□□□□□ -1.36
NEK3P51956 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.53□□□□□ -1.36
NEK3P51956 LINC02495-203ENST00000636704 242 ntBASIC6.53□□□□□ -1.36
NEK3P51956 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.53□□□□□ -1.36
NEK3P51956 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
NEK3P51956 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.53□□□□□ -1.36
NEK3P51956 AC079298.1-201ENST00000625026 1619 ntBASIC6.53□□□□□ -1.36
NEK3P51956 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NEK3P51956 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.53□□□□□ -1.36
NEK3P51956 AL442128.2-201ENST00000620246 1824 ntBASIC6.53□□□□□ -1.36
NEK3P51956 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.36
NEK3P51956 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
NEK3P51956 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.52□□□□□ -1.37
NEK3P51956 AL161912.4-201ENST00000623889 2468 ntBASIC6.52□□□□□ -1.37
NEK3P51956 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
NEK3P51956 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NEK3P51956 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NEK3P51956 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
NEK3P51956 RNFT1P3-201ENST00000340898 1052 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms