Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC7.33□□□□□ -1.24
MRE11P49959 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.33□□□□□ -1.24
MRE11P49959 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC7.33□□□□□ -1.24
MRE11P49959 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC7.33□□□□□ -1.24
MRE11P49959 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.33□□□□□ -1.24
MRE11P49959 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC7.33□□□□□ -1.24
MRE11P49959 HMGN1P8-201ENST00000463578 288 ntBASIC7.33□□□□□ -1.24
MRE11P49959 AC091982.1-202ENST00000473923 343 ntBASIC7.33□□□□□ -1.24
MRE11P49959 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC7.33□□□□□ -1.24
MRE11P49959 AC093801.2-201ENST00000503966 1050 ntBASIC7.33□□□□□ -1.24
MRE11P49959 AC008638.1-201ENST00000506035 866 ntBASIC7.33□□□□□ -1.24
MRE11P49959 AP001803.1-201ENST00000525668 147 ntBASIC7.33□□□□□ -1.24
MRE11P49959 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC7.33□□□□□ -1.24
MRE11P49959 AL049874.4-201ENST00000557593 255 ntBASIC7.33□□□□□ -1.24
MRE11P49959 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC7.33□□□□□ -1.24
MRE11P49959 AC023968.1-201ENST00000560719 475 ntBASIC7.33□□□□□ -1.24
MRE11P49959 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC7.33□□□□□ -1.24
MRE11P49959 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC7.33□□□□□ -1.24
MRE11P49959 AC002310.3-201ENST00000569728 723 ntBASIC7.33□□□□□ -1.24
MRE11P49959 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC7.33□□□□□ -1.24
MRE11P49959 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.33□□□□□ -1.24
MRE11P49959 AC006946.3-201ENST00000609791 756 ntBASIC7.33□□□□□ -1.24
MRE11P49959 AC004948.1-201ENST00000609858 672 ntBASIC7.33□□□□□ -1.24
MRE11P49959 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
MRE11P49959 MIR6730-201ENST00000622213 67 ntBASIC7.33□□□□□ -1.24
MRE11P49959 AC009039.2-201ENST00000624524 529 ntBASIC7.33□□□□□ -1.24
MRE11P49959 AC116667.2-201ENST00000641075 823 ntBASIC7.33□□□□□ -1.24
MRE11P49959 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
MRE11P49959 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
MRE11P49959 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC7.33□□□□□ -1.24
MRE11P49959 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
MRE11P49959 MTCO1P4-201ENST00000520516 1409 ntBASIC7.33□□□□□ -1.24
MRE11P49959 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
MRE11P49959 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
MRE11P49959 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
MRE11P49959 AC095038.1-201ENST00000429248 1591 ntBASIC7.33□□□□□ -1.24
MRE11P49959 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.33□□□□□ -1.24
MRE11P49959 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
MRE11P49959 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
MRE11P49959 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
MRE11P49959 AC138907.8-201ENST00000623981 2256 ntBASIC7.32□□□□□ -1.24
MRE11P49959 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
MRE11P49959 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.32□□□□□ -1.24
MRE11P49959 AC102941.1-201ENST00000567616 1537 ntBASIC7.32□□□□□ -1.24
MRE11P49959 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
MRE11P49959 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
MRE11P49959 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.32□□□□□ -1.24
MRE11P49959 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
MRE11P49959 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC7.32□□□□□ -1.24
MRE11P49959 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
MRE11P49959 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC7.32□□□□□ -1.24
MRE11P49959 RNU1-5P-201ENST00000362684 144 ntBASIC7.32□□□□□ -1.24
MRE11P49959 RNA5SP478-201ENST00000364657 115 ntBASIC7.32□□□□□ -1.24
MRE11P49959 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
MRE11P49959 MARK2P12-201ENST00000420129 585 ntBASIC7.32□□□□□ -1.24
MRE11P49959 ZBTB8OSP2-201ENST00000423890 504 ntBASIC7.32□□□□□ -1.24
MRE11P49959 USP24P1-201ENST00000433802 779 ntBASIC7.32□□□□□ -1.24
MRE11P49959 AL691517.1-201ENST00000440833 1235 ntBASIC7.32□□□□□ -1.24
MRE11P49959 AC092967.1-201ENST00000449016 481 ntBASIC7.32□□□□□ -1.24
MRE11P49959 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC7.32□□□□□ -1.24
MRE11P49959 OSTCP1-201ENST00000455507 450 ntBASIC7.32□□□□□ -1.24
MRE11P49959 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC7.32□□□□□ -1.24
MRE11P49959 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC7.32□□□□□ -1.24
MRE11P49959 EIF2S2P4-201ENST00000461070 984 ntBASIC7.32□□□□□ -1.24
MRE11P49959 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
MRE11P49959 AC092902.1-201ENST00000486999 259 ntBASIC7.32□□□□□ -1.24
MRE11P49959 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC7.32□□□□□ -1.24
MRE11P49959 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC7.32□□□□□ -1.24
MRE11P49959 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC7.32□□□□□ -1.24
MRE11P49959 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC7.32□□□□□ -1.24
MRE11P49959 AC016550.3-201ENST00000515706 767 ntBASIC7.32□□□□□ -1.24
MRE11P49959 AP006245.2-201ENST00000522004 300 ntBASIC7.32□□□□□ -1.24
MRE11P49959 AC134349.2-201ENST00000535136 910 ntBASIC7.32□□□□□ -1.24
MRE11P49959 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC7.32□□□□□ -1.24
MRE11P49959 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.32□□□□□ -1.24
MRE11P49959 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.32□□□□□ -1.24
MRE11P49959 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC7.32□□□□□ -1.24
MRE11P49959 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.32□□□□□ -1.24
MRE11P49959 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC7.32□□□□□ -1.24
MRE11P49959 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC7.32□□□□□ -1.24
MRE11P49959 AC008521.2-201ENST00000591021 259 ntBASIC7.32□□□□□ -1.24
MRE11P49959 AC040174.2-201ENST00000602701 465 ntBASIC7.32□□□□□ -1.24
MRE11P49959 AC034236.3-201ENST00000605999 461 ntBASIC7.32□□□□□ -1.24
MRE11P49959 AC068726.1-201ENST00000610993 341 ntBASIC7.32□□□□□ -1.24
MRE11P49959 AL161420.1-201ENST00000619393 264 ntBASIC7.32□□□□□ -1.24
MRE11P49959 AC018692.2-201ENST00000624130 348 ntBASIC7.32□□□□□ -1.24
MRE11P49959 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.32□□□□□ -1.24
MRE11P49959 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC7.32□□□□□ -1.24
MRE11P49959 AC063952.1-203ENST00000634410 658 ntBASIC7.32□□□□□ -1.24
MRE11P49959 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.32□□□□□ -1.24
MRE11P49959 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
MRE11P49959 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
MRE11P49959 AC125238.2-201ENST00000430003 1440 ntBASIC7.32□□□□□ -1.24
MRE11P49959 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
MRE11P49959 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
MRE11P49959 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC7.32□□□□□ -1.24
MRE11P49959 LRRC37A15P-201ENST00000514785 1355 ntBASIC7.32□□□□□ -1.24
MRE11P49959 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.31□□□□□ -1.24
MRE11P49959 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
MRE11P49959 DLEU2L-201ENST00000371086 3555 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms