Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 BCORP1-203ENST00000513194 5093 ntBASIC5.18□□□□□ -1.58
CX3CR1P49238 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
CX3CR1P49238 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.17□□□□□ -1.58
CX3CR1P49238 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.17□□□□□ -1.58
CX3CR1P49238 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CX3CR1P49238 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CX3CR1P49238 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CX3CR1P49238 AC138907.8-201ENST00000623981 2256 ntBASIC5.17□□□□□ -1.58
CX3CR1P49238 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CX3CR1P49238 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CX3CR1P49238 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CX3CR1P49238 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CX3CR1P49238 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CX3CR1P49238 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CX3CR1P49238 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.17□□□□□ -1.58
CX3CR1P49238 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CX3CR1P49238 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CX3CR1P49238 RN7SKP250-201ENST00000363924 321 ntBASIC5.17□□□□□ -1.58
CX3CR1P49238 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CX3CR1P49238 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CX3CR1P49238 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.17□□□□□ -1.58
CX3CR1P49238 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.17□□□□□ -1.58
CX3CR1P49238 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.17□□□□□ -1.58
CX3CR1P49238 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.17□□□□□ -1.58
CX3CR1P49238 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.17□□□□□ -1.58
CX3CR1P49238 AL445928.1-201ENST00000435545 222 ntBASIC5.17□□□□□ -1.58
CX3CR1P49238 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CX3CR1P49238 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.17□□□□□ -1.58
CX3CR1P49238 HMGB1P7-201ENST00000450921 612 ntBASIC5.17□□□□□ -1.58
CX3CR1P49238 RPL38P3-201ENST00000484463 213 ntBASIC5.17□□□□□ -1.58
CX3CR1P49238 RN7SL612P-201ENST00000497704 295 ntBASIC5.17□□□□□ -1.58
CX3CR1P49238 AC106822.1-201ENST00000502647 526 ntBASIC5.17□□□□□ -1.58
CX3CR1P49238 OR7E99P-201ENST00000505750 922 ntBASIC5.17□□□□□ -1.58
CX3CR1P49238 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.17□□□□□ -1.58
CX3CR1P49238 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.17□□□□□ -1.58
CX3CR1P49238 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.17□□□□□ -1.58
CX3CR1P49238 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.17□□□□□ -1.58
CX3CR1P49238 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.17□□□□□ -1.58
CX3CR1P49238 RNU6-84P-201ENST00000607737 102 ntBASIC5.17□□□□□ -1.58
CX3CR1P49238 AL021918.2-201ENST00000613415 194 ntBASIC5.17□□□□□ -1.58
CX3CR1P49238 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.17□□□□□ -1.58
CX3CR1P49238 HTR1DP1-201ENST00000616500 888 ntBASIC5.17□□□□□ -1.58
CX3CR1P49238 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CX3CR1P49238 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.17□□□□□ -1.58
CX3CR1P49238 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CX3CR1P49238 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
CX3CR1P49238 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.17□□□□□ -1.58
CX3CR1P49238 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CX3CR1P49238 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CX3CR1P49238 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CX3CR1P49238 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.17□□□□□ -1.58
CX3CR1P49238 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CX3CR1P49238 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.16□□□□□ -1.58
CX3CR1P49238 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CX3CR1P49238 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CX3CR1P49238 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CX3CR1P49238 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CX3CR1P49238 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CX3CR1P49238 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CX3CR1P49238 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CX3CR1P49238 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CX3CR1P49238 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
CX3CR1P49238 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CX3CR1P49238 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CX3CR1P49238 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CX3CR1P49238 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CX3CR1P49238 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.16□□□□□ -1.58
CX3CR1P49238 RNA5SP279-201ENST00000365513 117 ntBASIC5.16□□□□□ -1.58
CX3CR1P49238 U3.23-201ENST00000391132 200 ntBASIC5.16□□□□□ -1.58
CX3CR1P49238 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.16□□□□□ -1.58
CX3CR1P49238 THEM7P-201ENST00000419556 672 ntBASIC5.16□□□□□ -1.58
CX3CR1P49238 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.16□□□□□ -1.58
CX3CR1P49238 AC096632.2-201ENST00000438139 1239 ntBASIC5.16□□□□□ -1.58
CX3CR1P49238 AL353662.1-201ENST00000439099 327 ntBASIC5.16□□□□□ -1.58
CX3CR1P49238 RPSAP40-201ENST00000442343 891 ntBASIC5.16□□□□□ -1.58
CX3CR1P49238 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.16□□□□□ -1.58
CX3CR1P49238 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.16□□□□□ -1.58
CX3CR1P49238 AL445466.1-201ENST00000448432 357 ntBASIC5.16□□□□□ -1.58
CX3CR1P49238 RSU1P1-201ENST00000453416 441 ntBASIC5.16□□□□□ -1.58
CX3CR1P49238 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.16□□□□□ -1.58
CX3CR1P49238 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.16□□□□□ -1.58
CX3CR1P49238 AC023245.1-201ENST00000468501 517 ntBASIC5.16□□□□□ -1.58
CX3CR1P49238 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.16□□□□□ -1.58
CX3CR1P49238 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CX3CR1P49238 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.16□□□□□ -1.58
CX3CR1P49238 AC105420.1-201ENST00000504389 582 ntBASIC5.16□□□□□ -1.58
CX3CR1P49238 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.16□□□□□ -1.58
CX3CR1P49238 AC078899.1-201ENST00000521432 1185 ntBASIC5.16□□□□□ -1.58
CX3CR1P49238 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.16□□□□□ -1.58
CX3CR1P49238 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.16□□□□□ -1.58
CX3CR1P49238 AP003033.2-201ENST00000528901 805 ntBASIC5.16□□□□□ -1.58
CX3CR1P49238 OR4A41P-201ENST00000533053 928 ntBASIC5.16□□□□□ -1.58
CX3CR1P49238 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.16□□□□□ -1.58
CX3CR1P49238 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.16□□□□□ -1.58
CX3CR1P49238 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.16□□□□□ -1.58
CX3CR1P49238 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.16□□□□□ -1.58
CX3CR1P49238 AC060780.2-201ENST00000589047 198 ntBASIC5.16□□□□□ -1.58
CX3CR1P49238 AC012254.3-201ENST00000591183 2117 ntBASIC5.16□□□□□ -1.58
CX3CR1P49238 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.16□□□□□ -1.58
CX3CR1P49238 AC006115.2-201ENST00000596823 202 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms