Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.86□□□□□ -1.47
RPA3P35244 AC023271.1-201ENST00000445936 1090 ntBASIC5.86□□□□□ -1.47
RPA3P35244 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.86□□□□□ -1.47
RPA3P35244 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.86□□□□□ -1.47
RPA3P35244 AC004129.2-201ENST00000457229 287 ntBASIC5.86□□□□□ -1.47
RPA3P35244 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.86□□□□□ -1.47
RPA3P35244 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.86□□□□□ -1.47
RPA3P35244 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.86□□□□□ -1.47
RPA3P35244 RNA5SP473-201ENST00000516402 125 ntBASIC5.86□□□□□ -1.47
RPA3P35244 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.86□□□□□ -1.47
RPA3P35244 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.86□□□□□ -1.47
RPA3P35244 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RPA3P35244 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.86□□□□□ -1.47
RPA3P35244 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.86□□□□□ -1.47
RPA3P35244 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.86□□□□□ -1.47
RPA3P35244 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.86□□□□□ -1.47
RPA3P35244 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.86□□□□□ -1.47
RPA3P35244 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.86□□□□□ -1.47
RPA3P35244 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RPA3P35244 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.86□□□□□ -1.47
RPA3P35244 AL353729.2-201ENST00000605859 1249 ntBASIC5.86□□□□□ -1.47
RPA3P35244 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.86□□□□□ -1.47
RPA3P35244 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.86□□□□□ -1.47
RPA3P35244 AC092266.1-201ENST00000610958 165 ntBASIC5.86□□□□□ -1.47
RPA3P35244 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
RPA3P35244 AL445670.1-201ENST00000618889 801 ntBASIC5.86□□□□□ -1.47
RPA3P35244 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
RPA3P35244 AL357562.1-201ENST00000624911 609 ntBASIC5.86□□□□□ -1.47
RPA3P35244 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.86□□□□□ -1.47
RPA3P35244 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RPA3P35244 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.86□□□□□ -1.47
RPA3P35244 AC007998.4-201ENST00000612496 2533 ntBASIC5.86□□□□□ -1.47
RPA3P35244 Z95114.1-201ENST00000624264 14574 ntBASIC5.85□□□□□ -1.47
RPA3P35244 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
RPA3P35244 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RPA3P35244 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RPA3P35244 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
RPA3P35244 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
RPA3P35244 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.85□□□□□ -1.47
RPA3P35244 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.85□□□□□ -1.47
RPA3P35244 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
RPA3P35244 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
RPA3P35244 PARP4P2-201ENST00000446672 3326 ntBASIC5.85□□□□□ -1.47
RPA3P35244 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
RPA3P35244 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RPA3P35244 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
RPA3P35244 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.85□□□□□ -1.47
RPA3P35244 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RPA3P35244 COX6B1P3-201ENST00000312310 260 ntBASIC5.85□□□□□ -1.47
RPA3P35244 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
RPA3P35244 SNORA51.9-201ENST00000384295 124 ntBASIC5.85□□□□□ -1.47
RPA3P35244 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RPA3P35244 VN1R12P-201ENST00000403778 876 ntBASIC5.85□□□□□ -1.47
RPA3P35244 SNRPEP6-201ENST00000407465 277 ntBASIC5.85□□□□□ -1.47
RPA3P35244 RNU2-18P-201ENST00000411224 162 ntBASIC5.85□□□□□ -1.47
RPA3P35244 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.85□□□□□ -1.47
RPA3P35244 RPL24P2-201ENST00000421023 475 ntBASIC5.85□□□□□ -1.47
RPA3P35244 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.85□□□□□ -1.47
RPA3P35244 AC007679.3-201ENST00000434035 414 ntBASIC5.85□□□□□ -1.47
RPA3P35244 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.85□□□□□ -1.47
RPA3P35244 PNKDP1-201ENST00000435914 430 ntBASIC5.85□□□□□ -1.47
RPA3P35244 AMYP1-201ENST00000440059 1023 ntBASIC5.85□□□□□ -1.47
RPA3P35244 AC068228.1-201ENST00000461723 211 ntBASIC5.85□□□□□ -1.47
RPA3P35244 RN7SL170P-201ENST00000487098 295 ntBASIC5.85□□□□□ -1.47
RPA3P35244 AL158068.1-201ENST00000506116 616 ntBASIC5.85□□□□□ -1.47
RPA3P35244 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.85□□□□□ -1.47
RPA3P35244 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.85□□□□□ -1.47
RPA3P35244 GAPDHP62-201ENST00000515313 990 ntBASIC5.85□□□□□ -1.47
RPA3P35244 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.85□□□□□ -1.47
RPA3P35244 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.85□□□□□ -1.47
RPA3P35244 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.85□□□□□ -1.47
RPA3P35244 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.85□□□□□ -1.47
RPA3P35244 MIR4271-201ENST00000582451 67 ntBASIC5.85□□□□□ -1.47
RPA3P35244 HIRAP1-201ENST00000605318 787 ntBASIC5.85□□□□□ -1.47
RPA3P35244 AP001437.1-201ENST00000608783 456 ntBASIC5.85□□□□□ -1.47
RPA3P35244 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.85□□□□□ -1.47
RPA3P35244 AC073488.3-201ENST00000631611 778 ntBASIC5.85□□□□□ -1.47
RPA3P35244 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
RPA3P35244 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
RPA3P35244 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RPA3P35244 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
RPA3P35244 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.84□□□□□ -1.47
RPA3P35244 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RPA3P35244 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RPA3P35244 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RPA3P35244 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
RPA3P35244 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RPA3P35244 AL354854.1-201ENST00000455940 1363 ntBASIC5.84□□□□□ -1.47
RPA3P35244 FBXL21-201ENST00000297158 1305 ntBASIC5.84□□□□□ -1.47
RPA3P35244 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RPA3P35244 AC107977.1-201ENST00000355745 939 ntBASIC5.84□□□□□ -1.47
RPA3P35244 RN7SKP145-201ENST00000363291 303 ntBASIC5.84□□□□□ -1.47
RPA3P35244 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.84□□□□□ -1.47
RPA3P35244 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.84□□□□□ -1.47
RPA3P35244 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.84□□□□□ -1.47
RPA3P35244 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.84□□□□□ -1.47
RPA3P35244 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RPA3P35244 AC092865.4-201ENST00000477936 615 ntBASIC5.84□□□□□ -1.47
RPA3P35244 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.84□□□□□ -1.47
RPA3P35244 AP003396.4-201ENST00000527574 265 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms