Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC130360.1-201ENST00000425489 1117 ntBASIC6.35□□□□□ -1.39
HOXC13P31276 BRWD1P3-201ENST00000428816 390 ntBASIC6.35□□□□□ -1.39
HOXC13P31276 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXC13P31276 GAPDHP48-201ENST00000436626 961 ntBASIC6.35□□□□□ -1.39
HOXC13P31276 SUMO2P3-201ENST00000438311 288 ntBASIC6.35□□□□□ -1.39
HOXC13P31276 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.35□□□□□ -1.39
HOXC13P31276 AL512593.1-201ENST00000444758 779 ntBASIC6.35□□□□□ -1.39
HOXC13P31276 REG1CP-206ENST00000447469 496 ntBASIC6.35□□□□□ -1.39
HOXC13P31276 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.35□□□□□ -1.39
HOXC13P31276 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXC13P31276 RN7SL193P-201ENST00000491708 276 ntBASIC6.35□□□□□ -1.39
HOXC13P31276 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.35□□□□□ -1.39
HOXC13P31276 CR383658.1-201ENST00000514609 734 ntBASIC6.35□□□□□ -1.39
HOXC13P31276 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.35□□□□□ -1.39
HOXC13P31276 AC130365.2-201ENST00000525882 1201 ntBASIC6.35□□□□□ -1.39
HOXC13P31276 AC092865.1-201ENST00000544395 1023 ntBASIC6.35□□□□□ -1.39
HOXC13P31276 AC016180.1-201ENST00000567945 403 ntBASIC6.35□□□□□ -1.39
HOXC13P31276 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
HOXC13P31276 AP005119.1-201ENST00000580956 292 ntBASIC6.35□□□□□ -1.39
HOXC13P31276 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXC13P31276 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXC13P31276 AC020916.2-201ENST00000591242 360 ntBASIC6.35□□□□□ -1.39
HOXC13P31276 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.35□□□□□ -1.39
HOXC13P31276 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
HOXC13P31276 AC013244.1-201ENST00000604279 193 ntBASIC6.35□□□□□ -1.39
HOXC13P31276 AL356608.1-201ENST00000610034 820 ntBASIC6.35□□□□□ -1.39
HOXC13P31276 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXC13P31276 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.35□□□□□ -1.39
HOXC13P31276 AC116667.2-201ENST00000641075 823 ntBASIC6.35□□□□□ -1.39
HOXC13P31276 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXC13P31276 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXC13P31276 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
HOXC13P31276 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXC13P31276 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXC13P31276 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXC13P31276 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXC13P31276 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HOXC13P31276 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.34□□□□□ -1.39
HOXC13P31276 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HOXC13P31276 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HOXC13P31276 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.34□□□□□ -1.39
HOXC13P31276 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HOXC13P31276 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.34□□□□□ -1.39
HOXC13P31276 AC097461.1-201ENST00000568928 2821 ntBASIC6.34□□□□□ -1.39
HOXC13P31276 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.34□□□□□ -1.39
HOXC13P31276 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.34□□□□□ -1.39
HOXC13P31276 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HOXC13P31276 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HOXC13P31276 SNORA21-201ENST00000362423 132 ntBASIC6.34□□□□□ -1.39
HOXC13P31276 RNA5SP251-201ENST00000410614 137 ntBASIC6.34□□□□□ -1.39
HOXC13P31276 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.34□□□□□ -1.39
HOXC13P31276 AC096644.3-201ENST00000416788 338 ntBASIC6.34□□□□□ -1.39
HOXC13P31276 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.34□□□□□ -1.39
HOXC13P31276 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.34□□□□□ -1.39
HOXC13P31276 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.34□□□□□ -1.39
HOXC13P31276 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.34□□□□□ -1.39
HOXC13P31276 DNAJC19P5-201ENST00000443295 316 ntBASIC6.34□□□□□ -1.39
HOXC13P31276 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.34□□□□□ -1.39
HOXC13P31276 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC6.34□□□□□ -1.39
HOXC13P31276 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.34□□□□□ -1.39
HOXC13P31276 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.34□□□□□ -1.39
HOXC13P31276 AC073594.1-201ENST00000462065 364 ntBASIC6.34□□□□□ -1.39
HOXC13P31276 RN7SL515P-201ENST00000463999 297 ntBASIC6.34□□□□□ -1.39
HOXC13P31276 AC011476.1-201ENST00000466725 307 ntBASIC6.34□□□□□ -1.39
HOXC13P31276 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.34□□□□□ -1.39
HOXC13P31276 RN7SL629P-201ENST00000489622 285 ntBASIC6.34□□□□□ -1.39
HOXC13P31276 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.34□□□□□ -1.39
HOXC13P31276 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.34□□□□□ -1.39
HOXC13P31276 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HOXC13P31276 AC007956.1-201ENST00000555623 542 ntBASIC6.34□□□□□ -1.39
HOXC13P31276 RNU4ATAC-201ENST00000580972 127 ntBASIC6.34□□□□□ -1.39
HOXC13P31276 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HOXC13P31276 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.34□□□□□ -1.39
HOXC13P31276 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.34□□□□□ -1.39
HOXC13P31276 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.34□□□□□ -1.39
HOXC13P31276 AC141002.1-201ENST00000607025 279 ntBASIC6.34□□□□□ -1.39
HOXC13P31276 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HOXC13P31276 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.34□□□□□ -1.39
HOXC13P31276 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.34□□□□□ -1.39
HOXC13P31276 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.34□□□□□ -1.39
HOXC13P31276 AL136228.1-201ENST00000622221 319 ntBASIC6.34□□□□□ -1.39
HOXC13P31276 AC073488.3-201ENST00000631611 778 ntBASIC6.34□□□□□ -1.39
HOXC13P31276 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
HOXC13P31276 AC073365.1-203ENST00000641055 1992 ntBASIC6.34□□□□□ -1.39
HOXC13P31276 AF287957.1-201ENST00000607368 1595 ntBASIC6.34□□□□□ -1.39
HOXC13P31276 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.39
HOXC13P31276 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.34□□□□□ -1.39
HOXC13P31276 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
HOXC13P31276 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HOXC13P31276 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
HOXC13P31276 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HOXC13P31276 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.34□□□□□ -1.39
HOXC13P31276 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
HOXC13P31276 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
HOXC13P31276 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.34□□□□□ -1.4
HOXC13P31276 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
HOXC13P31276 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6.34□□□□□ -1.4
HOXC13P31276 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.34□□□□□ -1.4
HOXC13P31276 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.4
HOXC13P31276 AC107021.2-201ENST00000567714 2095 ntBASIC6.34□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms