Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 NDUFAF4P2-201ENST00000445374 520 ntBASIC7.76□□□□□ -1.17
LIG1P18858 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC7.76□□□□□ -1.17
LIG1P18858 MGAT2P1-201ENST00000449718 797 ntBASIC7.76□□□□□ -1.17
LIG1P18858 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.76□□□□□ -1.17
LIG1P18858 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC7.76□□□□□ -1.17
LIG1P18858 GYG1P1-201ENST00000460864 698 ntBASIC7.76□□□□□ -1.17
LIG1P18858 AC126615.1-201ENST00000470084 630 ntBASIC7.76□□□□□ -1.17
LIG1P18858 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC7.76□□□□□ -1.17
LIG1P18858 TPT1P3-201ENST00000492841 512 ntBASIC7.76□□□□□ -1.17
LIG1P18858 AC122714.1-201ENST00000502510 459 ntBASIC7.76□□□□□ -1.17
LIG1P18858 AC034244.1-201ENST00000507687 207 ntBASIC7.76□□□□□ -1.17
LIG1P18858 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC7.76□□□□□ -1.17
LIG1P18858 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC7.76□□□□□ -1.17
LIG1P18858 OR5M6P-201ENST00000530227 937 ntBASIC7.76□□□□□ -1.17
LIG1P18858 SSU72P6-201ENST00000532644 488 ntBASIC7.76□□□□□ -1.17
LIG1P18858 CBX3P7-201ENST00000532876 502 ntBASIC7.76□□□□□ -1.17
LIG1P18858 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.76□□□□□ -1.17
LIG1P18858 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.76□□□□□ -1.17
LIG1P18858 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC7.76□□□□□ -1.17
LIG1P18858 AC023161.2-201ENST00000551218 780 ntBASIC7.76□□□□□ -1.17
LIG1P18858 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC7.76□□□□□ -1.17
LIG1P18858 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC7.76□□□□□ -1.17
LIG1P18858 AC004232.1-201ENST00000571388 208 ntBASIC7.76□□□□□ -1.17
LIG1P18858 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC7.76□□□□□ -1.17
LIG1P18858 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC7.76□□□□□ -1.17
LIG1P18858 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
LIG1P18858 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC7.76□□□□□ -1.17
LIG1P18858 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC7.76□□□□□ -1.17
LIG1P18858 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC7.76□□□□□ -1.17
LIG1P18858 Z82195.1-201ENST00000604558 398 ntBASIC7.76□□□□□ -1.17
LIG1P18858 AC239868.4-201ENST00000608318 671 ntBASIC7.76□□□□□ -1.17
LIG1P18858 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC7.76□□□□□ -1.17
LIG1P18858 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC7.76□□□□□ -1.17
LIG1P18858 VIS1.1-201ENST00000610517 203 ntBASIC7.76□□□□□ -1.17
LIG1P18858 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.76□□□□□ -1.17
LIG1P18858 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC7.76□□□□□ -1.17
LIG1P18858 AC007671.1-201ENST00000616957 830 ntBASIC7.76□□□□□ -1.17
LIG1P18858 AC025287.2-201ENST00000621911 668 ntBASIC7.76□□□□□ -1.17
LIG1P18858 AC008626.2-201ENST00000624425 248 ntBASIC7.76□□□□□ -1.17
LIG1P18858 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC7.76□□□□□ -1.17
LIG1P18858 MIR665-201ENST00000635949 72 ntBASIC7.76□□□□□ -1.17
LIG1P18858 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
LIG1P18858 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
LIG1P18858 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
LIG1P18858 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
LIG1P18858 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
LIG1P18858 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LIG1P18858 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
LIG1P18858 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
LIG1P18858 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.75□□□□□ -1.17
LIG1P18858 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LIG1P18858 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
LIG1P18858 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
LIG1P18858 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
LIG1P18858 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
LIG1P18858 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LIG1P18858 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
LIG1P18858 AC011504.1-201ENST00000623331 4103 ntBASIC7.75□□□□□ -1.17
LIG1P18858 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
LIG1P18858 RNA5SP65-201ENST00000363166 119 ntBASIC7.75□□□□□ -1.17
LIG1P18858 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC7.75□□□□□ -1.17
LIG1P18858 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC7.75□□□□□ -1.17
LIG1P18858 PPIAP26-201ENST00000377951 522 ntBASIC7.75□□□□□ -1.17
LIG1P18858 RNU5A-2P-201ENST00000384337 116 ntBASIC7.75□□□□□ -1.17
LIG1P18858 AC233289.1-201ENST00000403700 508 ntBASIC7.75□□□□□ -1.17
LIG1P18858 SFR1P1-201ENST00000403720 688 ntBASIC7.75□□□□□ -1.17
LIG1P18858 Z86062.1-201ENST00000406773 777 ntBASIC7.75□□□□□ -1.17
LIG1P18858 AL136100.1-201ENST00000407696 330 ntBASIC7.75□□□□□ -1.17
LIG1P18858 RN7SKP188-201ENST00000410789 317 ntBASIC7.75□□□□□ -1.17
LIG1P18858 RNU4-22P-201ENST00000411058 166 ntBASIC7.75□□□□□ -1.17
LIG1P18858 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC7.75□□□□□ -1.17
LIG1P18858 GAPDHP69-201ENST00000425504 1008 ntBASIC7.75□□□□□ -1.17
LIG1P18858 AC018804.1-201ENST00000430381 618 ntBASIC7.75□□□□□ -1.17
LIG1P18858 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC7.75□□□□□ -1.17
LIG1P18858 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC7.75□□□□□ -1.17
LIG1P18858 CRYGGP-201ENST00000443337 145 ntBASIC7.75□□□□□ -1.17
LIG1P18858 EEF1B2P5-201ENST00000444820 548 ntBASIC7.75□□□□□ -1.17
LIG1P18858 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC7.75□□□□□ -1.17
LIG1P18858 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC7.75□□□□□ -1.17
LIG1P18858 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC7.75□□□□□ -1.17
LIG1P18858 AL133480.2-201ENST00000456723 487 ntBASIC7.75□□□□□ -1.17
LIG1P18858 EIF3LP2-201ENST00000457262 807 ntBASIC7.75□□□□□ -1.17
LIG1P18858 AC079193.1-201ENST00000460497 588 ntBASIC7.75□□□□□ -1.17
LIG1P18858 AC092691.2-201ENST00000461787 803 ntBASIC7.75□□□□□ -1.17
LIG1P18858 RPS3AP43-201ENST00000479743 781 ntBASIC7.75□□□□□ -1.17
LIG1P18858 RN7SL849P-201ENST00000485236 295 ntBASIC7.75□□□□□ -1.17
LIG1P18858 RPL7L1P7-201ENST00000509986 724 ntBASIC7.75□□□□□ -1.17
LIG1P18858 AC110775.1-201ENST00000513721 462 ntBASIC7.75□□□□□ -1.17
LIG1P18858 AC096661.1-201ENST00000515870 822 ntBASIC7.75□□□□□ -1.17
LIG1P18858 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC7.75□□□□□ -1.17
LIG1P18858 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC7.75□□□□□ -1.17
LIG1P18858 RBMS2P1-201ENST00000525031 1226 ntBASIC7.75□□□□□ -1.17
LIG1P18858 AC069240.2-201ENST00000550242 609 ntBASIC7.75□□□□□ -1.17
LIG1P18858 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.75□□□□□ -1.17
LIG1P18858 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.75□□□□□ -1.17
LIG1P18858 RN7SL426P-201ENST00000579106 295 ntBASIC7.75□□□□□ -1.17
LIG1P18858 MIR5682-201ENST00000584864 76 ntBASIC7.75□□□□□ -1.17
LIG1P18858 AL589765.6-201ENST00000601909 549 ntBASIC7.75□□□□□ -1.17
LIG1P18858 AL953862.2-201ENST00000603089 820 ntBASIC7.75□□□□□ -1.17
LIG1P18858 AC107304.1-201ENST00000604229 296 ntBASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms