Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
HMGA1P17096 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HMGA1P17096 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
HMGA1P17096 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGA1P17096 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.97□□□□□ -1.45
HMGA1P17096 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGA1P17096 AC089998.1-201ENST00000548575 3141 ntBASIC5.97□□□□□ -1.45
HMGA1P17096 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HMGA1P17096 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.97□□□□□ -1.45
HMGA1P17096 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HMGA1P17096 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC5.97□□□□□ -1.45
HMGA1P17096 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
HMGA1P17096 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.97□□□□□ -1.45
HMGA1P17096 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
HMGA1P17096 MIR130A-201ENST00000385274 89 ntBASIC5.97□□□□□ -1.45
HMGA1P17096 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HMGA1P17096 RNA5SP251-201ENST00000410614 137 ntBASIC5.97□□□□□ -1.45
HMGA1P17096 AL133173.1-201ENST00000423458 397 ntBASIC5.97□□□□□ -1.45
HMGA1P17096 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.97□□□□□ -1.45
HMGA1P17096 AL365220.1-201ENST00000432923 399 ntBASIC5.97□□□□□ -1.45
HMGA1P17096 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.97□□□□□ -1.45
HMGA1P17096 RPL35AP19-201ENST00000469425 329 ntBASIC5.97□□□□□ -1.45
HMGA1P17096 SIAH1P1-201ENST00000479411 923 ntBASIC5.97□□□□□ -1.45
HMGA1P17096 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.97□□□□□ -1.45
HMGA1P17096 TRBV5-2-201ENST00000489095 273 ntBASIC5.97□□□□□ -1.45
HMGA1P17096 FTH1P8-201ENST00000498161 514 ntBASIC5.97□□□□□ -1.45
HMGA1P17096 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.97□□□□□ -1.45
HMGA1P17096 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.97□□□□□ -1.45
HMGA1P17096 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.97□□□□□ -1.45
HMGA1P17096 AC078899.1-201ENST00000521432 1185 ntBASIC5.97□□□□□ -1.45
HMGA1P17096 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.97□□□□□ -1.45
HMGA1P17096 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.97□□□□□ -1.45
HMGA1P17096 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HMGA1P17096 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.97□□□□□ -1.45
HMGA1P17096 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGA1P17096 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.97□□□□□ -1.45
HMGA1P17096 AC006115.2-201ENST00000596823 202 ntBASIC5.97□□□□□ -1.45
HMGA1P17096 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.97□□□□□ -1.45
HMGA1P17096 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGA1P17096 AL035661.1-201ENST00000620459 1144 ntBASIC5.97□□□□□ -1.45
HMGA1P17096 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HMGA1P17096 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC5.97□□□□□ -1.45
HMGA1P17096 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
HMGA1P17096 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.97□□□□□ -1.45
HMGA1P17096 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HMGA1P17096 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HMGA1P17096 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
HMGA1P17096 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
HMGA1P17096 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.45
HMGA1P17096 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
HMGA1P17096 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
HMGA1P17096 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.96□□□□□ -1.45
HMGA1P17096 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
HMGA1P17096 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
HMGA1P17096 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
HMGA1P17096 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.96□□□□□ -1.46
HMGA1P17096 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
HMGA1P17096 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.96□□□□□ -1.46
HMGA1P17096 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HMGA1P17096 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.96□□□□□ -1.46
HMGA1P17096 HSPD1P8-201ENST00000400121 1658 ntBASIC5.96□□□□□ -1.46
HMGA1P17096 GAPDHP42-201ENST00000406848 981 ntBASIC5.96□□□□□ -1.46
HMGA1P17096 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.96□□□□□ -1.46
HMGA1P17096 GABARAPL3-201ENST00000412799 354 ntBASIC5.96□□□□□ -1.46
HMGA1P17096 NPM1P4-201ENST00000414095 812 ntBASIC5.96□□□□□ -1.46
HMGA1P17096 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.96□□□□□ -1.46
HMGA1P17096 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.96□□□□□ -1.46
HMGA1P17096 SPRYD7P1-201ENST00000443861 570 ntBASIC5.96□□□□□ -1.46
HMGA1P17096 AP000547.1-201ENST00000454360 617 ntBASIC5.96□□□□□ -1.46
HMGA1P17096 RANP1-206ENST00000455094 651 ntBASIC5.96□□□□□ -1.46
HMGA1P17096 AC011225.1-201ENST00000457751 369 ntBASIC5.96□□□□□ -1.46
HMGA1P17096 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.96□□□□□ -1.46
HMGA1P17096 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.96□□□□□ -1.46
HMGA1P17096 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.96□□□□□ -1.46
HMGA1P17096 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HMGA1P17096 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.96□□□□□ -1.46
HMGA1P17096 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.96□□□□□ -1.46
HMGA1P17096 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.96□□□□□ -1.46
HMGA1P17096 DPPA3P2-202ENST00000557188 1219 ntBASIC5.96□□□□□ -1.46
HMGA1P17096 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.96□□□□□ -1.46
HMGA1P17096 AC015720.2-201ENST00000567709 334 ntBASIC5.96□□□□□ -1.46
HMGA1P17096 NPM1P45-201ENST00000583151 559 ntBASIC5.96□□□□□ -1.46
HMGA1P17096 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.96□□□□□ -1.46
HMGA1P17096 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.96□□□□□ -1.46
HMGA1P17096 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.96□□□□□ -1.46
HMGA1P17096 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HMGA1P17096 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HMGA1P17096 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HMGA1P17096 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HMGA1P17096 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
HMGA1P17096 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HMGA1P17096 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
HMGA1P17096 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HMGA1P17096 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HMGA1P17096 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HMGA1P17096 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.96□□□□□ -1.46
HMGA1P17096 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC5.96□□□□□ -1.46
HMGA1P17096 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGA1P17096 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
HMGA1P17096 AC022164.1-201ENST00000568767 2673 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms