Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXC4P09017 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXC4P09017 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
HOXC4P09017 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXC4P09017 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.77□□□□□ -1.49
HOXC4P09017 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXC4P09017 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
HOXC4P09017 LINC01963-201ENST00000562038 3148 ntBASIC5.77□□□□□ -1.49
HOXC4P09017 IMMTP1-201ENST00000435590 2219 ntBASIC5.76□□□□□ -1.49
HOXC4P09017 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXC4P09017 AP001157.1-201ENST00000550837 2339 ntBASIC5.76□□□□□ -1.49
HOXC4P09017 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC4P09017 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC4P09017 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC4P09017 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC4P09017 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
HOXC4P09017 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
HOXC4P09017 MIR143-201ENST00000385300 106 ntBASIC5.76□□□□□ -1.49
HOXC4P09017 AC087752.1-201ENST00000391360 558 ntBASIC5.76□□□□□ -1.49
HOXC4P09017 BMS1P17-202ENST00000416720 316 ntBASIC5.76□□□□□ -1.49
HOXC4P09017 AC127526.2-201ENST00000426436 775 ntBASIC5.76□□□□□ -1.49
HOXC4P09017 RPL12P16-201ENST00000431098 498 ntBASIC5.76□□□□□ -1.49
HOXC4P09017 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.76□□□□□ -1.49
HOXC4P09017 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXC4P09017 PPIAP20-201ENST00000449839 135 ntBASIC5.76□□□□□ -1.49
HOXC4P09017 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.76□□□□□ -1.49
HOXC4P09017 AC093166.4-201ENST00000457867 318 ntBASIC5.76□□□□□ -1.49
HOXC4P09017 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.76□□□□□ -1.49
HOXC4P09017 AL157777.1-201ENST00000468100 304 ntBASIC5.76□□□□□ -1.49
HOXC4P09017 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.76□□□□□ -1.49
HOXC4P09017 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXC4P09017 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.76□□□□□ -1.49
HOXC4P09017 AC106872.4-201ENST00000510050 523 ntBASIC5.76□□□□□ -1.49
HOXC4P09017 AC074255.1-201ENST00000511259 501 ntBASIC5.76□□□□□ -1.49
HOXC4P09017 RN7SKP288-201ENST00000516227 268 ntBASIC5.76□□□□□ -1.49
HOXC4P09017 MIR2117-201ENST00000516780 80 ntBASIC5.76□□□□□ -1.49
HOXC4P09017 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.76□□□□□ -1.49
HOXC4P09017 OR4A6P-201ENST00000534364 970 ntBASIC5.76□□□□□ -1.49
HOXC4P09017 AL121594.2-201ENST00000541658 472 ntBASIC5.76□□□□□ -1.49
HOXC4P09017 AC126615.2-201ENST00000553003 515 ntBASIC5.76□□□□□ -1.49
HOXC4P09017 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.76□□□□□ -1.49
HOXC4P09017 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.76□□□□□ -1.49
HOXC4P09017 AC125494.2-201ENST00000602431 657 ntBASIC5.76□□□□□ -1.49
HOXC4P09017 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.76□□□□□ -1.49
HOXC4P09017 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.76□□□□□ -1.49
HOXC4P09017 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC4P09017 AL034546.1-201ENST00000623740 3693 ntBASIC5.76□□□□□ -1.49
HOXC4P09017 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.76□□□□□ -1.49
HOXC4P09017 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC4P09017 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXC4P09017 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC4P09017 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC4P09017 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC4P09017 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC4P09017 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC4P09017 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.75□□□□□ -1.49
HOXC4P09017 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC4P09017 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
HOXC4P09017 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
HOXC4P09017 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC4P09017 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
HOXC4P09017 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC4P09017 AL121768.1-201ENST00000613917 2544 ntBASIC5.75□□□□□ -1.49
HOXC4P09017 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC4P09017 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC4P09017 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC4P09017 MIR323A-201ENST00000362199 86 ntBASIC5.75□□□□□ -1.49
HOXC4P09017 RNA5SP46-201ENST00000362370 120 ntBASIC5.75□□□□□ -1.49
HOXC4P09017 SNORD1C-201ENST00000363315 78 ntBASIC5.75□□□□□ -1.49
HOXC4P09017 RNA5SP394-201ENST00000364216 119 ntBASIC5.75□□□□□ -1.49
HOXC4P09017 RNA5SP251-201ENST00000410614 137 ntBASIC5.75□□□□□ -1.49
HOXC4P09017 RN7SKP286-201ENST00000410894 299 ntBASIC5.75□□□□□ -1.49
HOXC4P09017 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.75□□□□□ -1.49
HOXC4P09017 AC096775.1-201ENST00000437724 448 ntBASIC5.75□□□□□ -1.49
HOXC4P09017 AC002504.1-201ENST00000438281 691 ntBASIC5.75□□□□□ -1.49
HOXC4P09017 SUMO2P3-201ENST00000438311 288 ntBASIC5.75□□□□□ -1.49
HOXC4P09017 OR2AF1P-201ENST00000454899 889 ntBASIC5.75□□□□□ -1.49
HOXC4P09017 AL445687.2-201ENST00000458156 728 ntBASIC5.75□□□□□ -1.49
HOXC4P09017 AC023141.9-201ENST00000458734 412 ntBASIC5.75□□□□□ -1.49
HOXC4P09017 RPSAP37-201ENST00000470913 821 ntBASIC5.75□□□□□ -1.49
HOXC4P09017 RN7SL174P-201ENST00000475578 289 ntBASIC5.75□□□□□ -1.49
HOXC4P09017 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.75□□□□□ -1.49
HOXC4P09017 AC022215.1-201ENST00000481770 362 ntBASIC5.75□□□□□ -1.49
HOXC4P09017 RN7SL570P-201ENST00000484405 292 ntBASIC5.75□□□□□ -1.49
HOXC4P09017 RPL38P3-201ENST00000484463 213 ntBASIC5.75□□□□□ -1.49
HOXC4P09017 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.75□□□□□ -1.49
HOXC4P09017 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.75□□□□□ -1.49
HOXC4P09017 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.75□□□□□ -1.49
HOXC4P09017 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.75□□□□□ -1.49
HOXC4P09017 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.75□□□□□ -1.49
HOXC4P09017 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.75□□□□□ -1.49
HOXC4P09017 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.75□□□□□ -1.49
HOXC4P09017 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.75□□□□□ -1.49
HOXC4P09017 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.75□□□□□ -1.49
HOXC4P09017 AC015802.2-201ENST00000589690 189 ntBASIC5.75□□□□□ -1.49
HOXC4P09017 OR7A8P-201ENST00000595427 913 ntBASIC5.75□□□□□ -1.49
HOXC4P09017 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.75□□□□□ -1.49
HOXC4P09017 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
HOXC4P09017 FAM72A-208ENST00000607379 1139 ntBASIC5.75□□□□□ -1.49
HOXC4P09017 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms