Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.43□□□□□ -1.38
RB1P06400 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.43□□□□□ -1.38
RB1P06400 RN7SL515P-201ENST00000463999 297 ntBASIC6.43□□□□□ -1.38
RB1P06400 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.43□□□□□ -1.38
RB1P06400 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RB1P06400 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC6.43□□□□□ -1.38
RB1P06400 DUTP7-201ENST00000507982 486 ntBASIC6.43□□□□□ -1.38
RB1P06400 AC109481.1-201ENST00000509173 282 ntBASIC6.43□□□□□ -1.38
RB1P06400 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.43□□□□□ -1.38
RB1P06400 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RB1P06400 RNA5SP400-201ENST00000517155 111 ntBASIC6.43□□□□□ -1.38
RB1P06400 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.43□□□□□ -1.38
RB1P06400 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.43□□□□□ -1.38
RB1P06400 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.43□□□□□ -1.38
RB1P06400 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.43□□□□□ -1.38
RB1P06400 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.43□□□□□ -1.38
RB1P06400 AL137067.2-201ENST00000621202 131 ntBASIC6.43□□□□□ -1.38
RB1P06400 AC018445.2-201ENST00000622987 260 ntBASIC6.43□□□□□ -1.38
RB1P06400 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.43□□□□□ -1.38
RB1P06400 AL022323.4-201ENST00000623980 13120 ntBASIC6.43□□□□□ -1.38
RB1P06400 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.43□□□□□ -1.38
RB1P06400 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
RB1P06400 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RB1P06400 AC013488.1-201ENST00000526618 1838 ntBASIC6.43□□□□□ -1.38
RB1P06400 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
RB1P06400 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
RB1P06400 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RB1P06400 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC6.43□□□□□ -1.38
RB1P06400 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RB1P06400 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
RB1P06400 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RB1P06400 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.42□□□□□ -1.38
RB1P06400 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.42□□□□□ -1.38
RB1P06400 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RB1P06400 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
RB1P06400 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.42□□□□□ -1.38
RB1P06400 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RB1P06400 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.42□□□□□ -1.38
RB1P06400 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RB1P06400 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.42□□□□□ -1.38
RB1P06400 RNA5SP394-201ENST00000364216 119 ntBASIC6.42□□□□□ -1.38
RB1P06400 HMGB1P20-201ENST00000402555 677 ntBASIC6.42□□□□□ -1.38
RB1P06400 SPTLC1P2-201ENST00000407089 121 ntBASIC6.42□□□□□ -1.38
RB1P06400 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.42□□□□□ -1.38
RB1P06400 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.42□□□□□ -1.38
RB1P06400 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.42□□□□□ -1.38
RB1P06400 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.42□□□□□ -1.38
RB1P06400 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.42□□□□□ -1.38
RB1P06400 Z84478.1-201ENST00000438230 1219 ntBASIC6.42□□□□□ -1.38
RB1P06400 AL512593.1-201ENST00000444758 779 ntBASIC6.42□□□□□ -1.38
RB1P06400 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.42□□□□□ -1.38
RB1P06400 OR52Y1P-201ENST00000452418 828 ntBASIC6.42□□□□□ -1.38
RB1P06400 AL133445.1-201ENST00000467051 452 ntBASIC6.42□□□□□ -1.38
RB1P06400 PFN1P6-201ENST00000476786 399 ntBASIC6.42□□□□□ -1.38
RB1P06400 OR52A4P-203ENST00000498233 1014 ntBASIC6.42□□□□□ -1.38
RB1P06400 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RB1P06400 NPM1P27-201ENST00000502784 830 ntBASIC6.42□□□□□ -1.38
RB1P06400 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.42□□□□□ -1.38
RB1P06400 AC027229.1-201ENST00000583887 253 ntBASIC6.42□□□□□ -1.38
RB1P06400 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.42□□□□□ -1.38
RB1P06400 AC015802.2-201ENST00000589690 189 ntBASIC6.42□□□□□ -1.38
RB1P06400 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RB1P06400 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.42□□□□□ -1.38
RB1P06400 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.42□□□□□ -1.38
RB1P06400 CYCSP1-201ENST00000604815 315 ntBASIC6.42□□□□□ -1.38
RB1P06400 AC138473.1-201ENST00000605717 526 ntBASIC6.42□□□□□ -1.38
RB1P06400 MIR6798-201ENST00000612887 67 ntBASIC6.42□□□□□ -1.38
RB1P06400 RN7SL544P-201ENST00000617232 284 ntBASIC6.42□□□□□ -1.38
RB1P06400 AL445670.1-201ENST00000618889 801 ntBASIC6.42□□□□□ -1.38
RB1P06400 RN7SL763P-201ENST00000620922 284 ntBASIC6.42□□□□□ -1.38
RB1P06400 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RB1P06400 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
RB1P06400 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RB1P06400 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.42□□□□□ -1.38
RB1P06400 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RB1P06400 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RB1P06400 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RB1P06400 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RB1P06400 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RB1P06400 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
RB1P06400 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
RB1P06400 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RB1P06400 AC024587.1-201ENST00000505925 2157 ntBASIC6.41□□□□□ -1.38
RB1P06400 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RB1P06400 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RB1P06400 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
RB1P06400 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.41□□□□□ -1.38
RB1P06400 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
RB1P06400 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
RB1P06400 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.41□□□□□ -1.38
RB1P06400 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.41□□□□□ -1.38
RB1P06400 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
RB1P06400 AP002370.1-201ENST00000528055 1602 ntBASIC6.41□□□□□ -1.38
RB1P06400 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
RB1P06400 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
RB1P06400 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RB1P06400 U3.7-201ENST00000363668 216 ntBASIC6.41□□□□□ -1.38
RB1P06400 RNU11-6P-201ENST00000391127 133 ntBASIC6.41□□□□□ -1.38
RB1P06400 SNRPEP6-201ENST00000407465 277 ntBASIC6.41□□□□□ -1.38
RB1P06400 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms