Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC063955.1-201ENST00000462872 685 ntBASIC4.93□□□□□ -1.62
CD74P04233 AC135999.1-201ENST00000478962 479 ntBASIC4.93□□□□□ -1.62
CD74P04233 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.93□□□□□ -1.62
CD74P04233 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.93□□□□□ -1.62
CD74P04233 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CD74P04233 AC138409.2-202ENST00000507274 458 ntBASIC4.93□□□□□ -1.62
CD74P04233 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.93□□□□□ -1.62
CD74P04233 MINOS1P4-201ENST00000515470 318 ntBASIC4.93□□□□□ -1.62
CD74P04233 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC4.93□□□□□ -1.62
CD74P04233 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC4.93□□□□□ -1.62
CD74P04233 CYCSP25-201ENST00000525280 316 ntBASIC4.93□□□□□ -1.62
CD74P04233 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC4.93□□□□□ -1.62
CD74P04233 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC4.93□□□□□ -1.62
CD74P04233 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC4.93□□□□□ -1.62
CD74P04233 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC4.93□□□□□ -1.62
CD74P04233 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC4.93□□□□□ -1.62
CD74P04233 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC4.93□□□□□ -1.62
CD74P04233 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC4.93□□□□□ -1.62
CD74P04233 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.93□□□□□ -1.62
CD74P04233 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.93□□□□□ -1.62
CD74P04233 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC4.93□□□□□ -1.62
CD74P04233 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.93□□□□□ -1.62
CD74P04233 MIR6811-201ENST00000620409 58 ntBASIC4.93□□□□□ -1.62
CD74P04233 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC4.93□□□□□ -1.62
CD74P04233 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.93□□□□□ -1.62
CD74P04233 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CD74P04233 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CD74P04233 AC009220.2-201ENST00000489759 1751 ntBASIC4.93□□□□□ -1.62
CD74P04233 CASC19-246ENST00000641625 1606 ntBASIC4.93□□□□□ -1.62
CD74P04233 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CD74P04233 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CD74P04233 AC018809.2-201ENST00000602436 3823 ntBASIC4.93□□□□□ -1.62
CD74P04233 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CD74P04233 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CD74P04233 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CD74P04233 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.93□□□□□ -1.62
CD74P04233 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CD74P04233 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CD74P04233 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CD74P04233 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
CD74P04233 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CD74P04233 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.92□□□□□ -1.62
CD74P04233 AL137141.1-201ENST00000624622 4836 ntBASIC4.92□□□□□ -1.62
CD74P04233 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.92□□□□□ -1.62
CD74P04233 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.92□□□□□ -1.62
CD74P04233 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.92□□□□□ -1.62
CD74P04233 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CD74P04233 AC005005.4-201ENST00000623789 16698 ntBASIC4.92□□□□□ -1.62
CD74P04233 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CD74P04233 SNORA7A-201ENST00000384765 139 ntBASIC4.92□□□□□ -1.62
CD74P04233 RNA5SP156-201ENST00000410250 110 ntBASIC4.92□□□□□ -1.62
CD74P04233 RN7SKP144-201ENST00000411108 279 ntBASIC4.92□□□□□ -1.62
CD74P04233 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC4.92□□□□□ -1.62
CD74P04233 RPS7P8-201ENST00000418311 581 ntBASIC4.92□□□□□ -1.62
CD74P04233 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.92□□□□□ -1.62
CD74P04233 AL359265.1-201ENST00000440296 795 ntBASIC4.92□□□□□ -1.62
CD74P04233 AL356121.1-201ENST00000442911 156 ntBASIC4.92□□□□□ -1.62
CD74P04233 ZNF619P1-201ENST00000446539 752 ntBASIC4.92□□□□□ -1.62
CD74P04233 COX4I1P2-201ENST00000447446 547 ntBASIC4.92□□□□□ -1.62
CD74P04233 PPIAP32-201ENST00000449940 472 ntBASIC4.92□□□□□ -1.62
CD74P04233 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC4.92□□□□□ -1.62
CD74P04233 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.92□□□□□ -1.62
CD74P04233 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC4.92□□□□□ -1.62
CD74P04233 EIF3LP3-201ENST00000495197 822 ntBASIC4.92□□□□□ -1.62
CD74P04233 RPS17P5-201ENST00000498293 408 ntBASIC4.92□□□□□ -1.62
CD74P04233 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC4.92□□□□□ -1.62
CD74P04233 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC4.92□□□□□ -1.62
CD74P04233 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.92□□□□□ -1.62
CD74P04233 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.92□□□□□ -1.62
CD74P04233 OR4A17P-201ENST00000526032 904 ntBASIC4.92□□□□□ -1.62
CD74P04233 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC4.92□□□□□ -1.62
CD74P04233 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.92□□□□□ -1.62
CD74P04233 NIFKP4-201ENST00000567275 1192 ntBASIC4.92□□□□□ -1.62
CD74P04233 LINC00556-201ENST00000569603 412 ntBASIC4.92□□□□□ -1.62
CD74P04233 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC4.92□□□□□ -1.62
CD74P04233 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.92□□□□□ -1.62
CD74P04233 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CD74P04233 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CD74P04233 AC073488.6-201ENST00000632293 754 ntBASIC4.92□□□□□ -1.62
CD74P04233 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC4.92□□□□□ -1.62
CD74P04233 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC4.92□□□□□ -1.62
CD74P04233 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CD74P04233 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CD74P04233 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CD74P04233 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CD74P04233 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
CD74P04233 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.92□□□□□ -1.62
CD74P04233 GDA-209ENST00000545168 5362 ntTSL 2 BASIC4.92□□□□□ -1.62
CD74P04233 EIF3EP1-201ENST00000433978 1316 ntBASIC4.92□□□□□ -1.62
CD74P04233 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CD74P04233 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CD74P04233 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
CD74P04233 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.91□□□□□ -1.62
CD74P04233 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
CD74P04233 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CD74P04233 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CD74P04233 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CD74P04233 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CD74P04233 HSPA8P14-201ENST00000552265 1805 ntBASIC4.91□□□□□ -1.62
CD74P04233 U3.7-201ENST00000363668 216 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms