Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC090220.1-201ENST00000593078 1699 ntBASIC6.2□□□□□ -1.42
APOEP02649 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
APOEP02649 AF287957.1-201ENST00000607368 1595 ntBASIC6.2□□□□□ -1.42
APOEP02649 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
APOEP02649 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
APOEP02649 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.2□□□□□ -1.42
APOEP02649 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.2□□□□□ -1.42
APOEP02649 MIR1282-201ENST00000408865 101 ntBASIC6.2□□□□□ -1.42
APOEP02649 RPL35AP3-201ENST00000414680 288 ntBASIC6.2□□□□□ -1.42
APOEP02649 DPPA2P2-201ENST00000418220 897 ntBASIC6.2□□□□□ -1.42
APOEP02649 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
APOEP02649 AC066692.1-201ENST00000421721 457 ntBASIC6.2□□□□□ -1.42
APOEP02649 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.2□□□□□ -1.42
APOEP02649 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.2□□□□□ -1.42
APOEP02649 AC021876.1-201ENST00000425959 359 ntBASIC6.2□□□□□ -1.42
APOEP02649 AC099677.3-201ENST00000427081 395 ntBASIC6.2□□□□□ -1.42
APOEP02649 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
APOEP02649 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
APOEP02649 RPS10P18-201ENST00000442662 495 ntBASIC6.2□□□□□ -1.42
APOEP02649 AL359839.1-201ENST00000451975 1160 ntBASIC6.2□□□□□ -1.42
APOEP02649 GEMIN2P1-201ENST00000454246 752 ntBASIC6.2□□□□□ -1.42
APOEP02649 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
APOEP02649 ACA64.4-201ENST00000459070 127 ntBASIC6.2□□□□□ -1.42
APOEP02649 RN7SL269P-201ENST00000467795 305 ntBASIC6.2□□□□□ -1.42
APOEP02649 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.2□□□□□ -1.42
APOEP02649 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.2□□□□□ -1.42
APOEP02649 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.2□□□□□ -1.42
APOEP02649 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.2□□□□□ -1.42
APOEP02649 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.2□□□□□ -1.42
APOEP02649 TRIM77BP-201ENST00000524985 1119 ntBASIC6.2□□□□□ -1.42
APOEP02649 OR4A42P-201ENST00000531397 938 ntBASIC6.2□□□□□ -1.42
APOEP02649 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.2□□□□□ -1.42
APOEP02649 AL049779.3-201ENST00000557141 606 ntBASIC6.2□□□□□ -1.42
APOEP02649 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.2□□□□□ -1.42
APOEP02649 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.2□□□□□ -1.42
APOEP02649 AC023389.2-201ENST00000580031 955 ntBASIC6.2□□□□□ -1.42
APOEP02649 MIR4776-2-201ENST00000580204 80 ntBASIC6.2□□□□□ -1.42
APOEP02649 MIR4433B-201ENST00000581329 102 ntBASIC6.2□□□□□ -1.42
APOEP02649 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.2□□□□□ -1.42
APOEP02649 AP001267.4-201ENST00000602598 545 ntBASIC6.2□□□□□ -1.42
APOEP02649 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.2□□□□□ -1.42
APOEP02649 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.2□□□□□ -1.42
APOEP02649 MIR6809-201ENST00000612189 116 ntBASIC6.2□□□□□ -1.42
APOEP02649 AL096712.1-201ENST00000614561 159 ntBASIC6.2□□□□□ -1.42
APOEP02649 AL359742.1-201ENST00000622497 540 ntBASIC6.2□□□□□ -1.42
APOEP02649 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.2□□□□□ -1.42
APOEP02649 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
APOEP02649 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
APOEP02649 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.2□□□□□ -1.42
APOEP02649 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.2□□□□□ -1.42
APOEP02649 AC093671.1-201ENST00000624981 2929 ntBASIC6.2□□□□□ -1.42
APOEP02649 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
APOEP02649 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
APOEP02649 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
APOEP02649 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
APOEP02649 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.19□□□□□ -1.42
APOEP02649 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.19□□□□□ -1.42
APOEP02649 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.19□□□□□ -1.42
APOEP02649 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
APOEP02649 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
APOEP02649 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
APOEP02649 SELENOWP1-201ENST00000322792 252 ntBASIC6.19□□□□□ -1.42
APOEP02649 RNA5SP477-201ENST00000362639 119 ntBASIC6.19□□□□□ -1.42
APOEP02649 RNA5SP211-201ENST00000365516 117 ntBASIC6.19□□□□□ -1.42
APOEP02649 AL096711.1-201ENST00000404780 554 ntBASIC6.19□□□□□ -1.42
APOEP02649 AC016739.1-201ENST00000405359 345 ntBASIC6.19□□□□□ -1.42
APOEP02649 RPS14P4-201ENST00000415880 418 ntBASIC6.19□□□□□ -1.42
APOEP02649 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.19□□□□□ -1.42
APOEP02649 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.19□□□□□ -1.42
APOEP02649 RPL12P16-201ENST00000431098 498 ntBASIC6.19□□□□□ -1.42
APOEP02649 AL445928.1-201ENST00000435545 222 ntBASIC6.19□□□□□ -1.42
APOEP02649 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.19□□□□□ -1.42
APOEP02649 RPS7P3-201ENST00000443360 580 ntBASIC6.19□□□□□ -1.42
APOEP02649 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
APOEP02649 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.19□□□□□ -1.42
APOEP02649 AL122020.1-201ENST00000472287 459 ntBASIC6.19□□□□□ -1.42
APOEP02649 RN7SL193P-201ENST00000491708 276 ntBASIC6.19□□□□□ -1.42
APOEP02649 Y_RNA.667-201ENST00000516212 107 ntBASIC6.19□□□□□ -1.42
APOEP02649 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.19□□□□□ -1.42
APOEP02649 AC244502.2-201ENST00000543361 851 ntBASIC6.19□□□□□ -1.42
APOEP02649 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.19□□□□□ -1.42
APOEP02649 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.19□□□□□ -1.42
APOEP02649 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.19□□□□□ -1.42
APOEP02649 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.19□□□□□ -1.42
APOEP02649 FO681491.1-202ENST00000623392 737 ntBASIC6.19□□□□□ -1.42
APOEP02649 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
APOEP02649 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
APOEP02649 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
APOEP02649 AC027088.4-201ENST00000611559 1947 ntBASIC6.19□□□□□ -1.42
APOEP02649 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
APOEP02649 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.19□□□□□ -1.42
APOEP02649 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
APOEP02649 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
APOEP02649 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
APOEP02649 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.18□□□□□ -1.42
APOEP02649 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
APOEP02649 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
APOEP02649 MSL3P1-202ENST00000440028 1468 ntBASIC6.18□□□□□ -1.42
APOEP02649 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
APOEP02649 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms