Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SCN2BO60939 AL157777.1-201ENST00000468100 304 ntBASIC5.55□□□□□ -1.52
SCN2BO60939 RN7SL362P-201ENST00000494228 267 ntBASIC5.55□□□□□ -1.52
SCN2BO60939 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.55□□□□□ -1.52
SCN2BO60939 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.55□□□□□ -1.52
SCN2BO60939 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.55□□□□□ -1.52
SCN2BO60939 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.55□□□□□ -1.52
SCN2BO60939 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.55□□□□□ -1.52
SCN2BO60939 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.55□□□□□ -1.52
SCN2BO60939 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.55□□□□□ -1.52
SCN2BO60939 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.55□□□□□ -1.52
SCN2BO60939 OR1E3-201ENST00000575608 948 ntBASIC5.55□□□□□ -1.52
SCN2BO60939 AC138207.8-204ENST00000579588 527 ntBASIC5.55□□□□□ -1.52
SCN2BO60939 AC012254.3-201ENST00000591183 2117 ntBASIC5.55□□□□□ -1.52
SCN2BO60939 AC011500.1-201ENST00000601963 469 ntBASIC5.55□□□□□ -1.52
SCN2BO60939 AL513327.3-201ENST00000602618 469 ntBASIC5.55□□□□□ -1.52
SCN2BO60939 AC073333.2-201ENST00000603589 769 ntBASIC5.55□□□□□ -1.52
SCN2BO60939 AC145423.1-201ENST00000605712 336 ntBASIC5.55□□□□□ -1.52
SCN2BO60939 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.55□□□□□ -1.52
SCN2BO60939 AC096708.4-201ENST00000620563 552 ntBASIC5.55□□□□□ -1.52
SCN2BO60939 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.55□□□□□ -1.52
SCN2BO60939 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.55□□□□□ -1.52
SCN2BO60939 AL357140.4-201ENST00000636827 412 ntBASIC5.55□□□□□ -1.52
SCN2BO60939 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SCN2BO60939 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.55□□□□□ -1.52
SCN2BO60939 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SCN2BO60939 AC011933.2-201ENST00000578539 2790 ntBASIC5.55□□□□□ -1.52
SCN2BO60939 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SCN2BO60939 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SCN2BO60939 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.55□□□□□ -1.52
SCN2BO60939 AC093671.1-201ENST00000624981 2929 ntBASIC5.54□□□□□ -1.52
SCN2BO60939 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SCN2BO60939 FBXL21-201ENST00000297158 1305 ntBASIC5.54□□□□□ -1.52
SCN2BO60939 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SCN2BO60939 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SCN2BO60939 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SCN2BO60939 SELENOWP1-201ENST00000322792 252 ntBASIC5.54□□□□□ -1.52
SCN2BO60939 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SCN2BO60939 RNA5SP453-201ENST00000362503 119 ntBASIC5.54□□□□□ -1.52
SCN2BO60939 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SCN2BO60939 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SCN2BO60939 RNA5SP91-201ENST00000390902 119 ntBASIC5.54□□□□□ -1.52
SCN2BO60939 SNRPEP6-201ENST00000407465 277 ntBASIC5.54□□□□□ -1.52
SCN2BO60939 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.54□□□□□ -1.52
SCN2BO60939 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.54□□□□□ -1.52
SCN2BO60939 RANP7-201ENST00000418085 644 ntBASIC5.54□□□□□ -1.52
SCN2BO60939 THEM7P-201ENST00000419556 672 ntBASIC5.54□□□□□ -1.52
SCN2BO60939 FAM183DP-201ENST00000421987 399 ntBASIC5.54□□□□□ -1.52
SCN2BO60939 REREP1Y-201ENST00000422655 198 ntBASIC5.54□□□□□ -1.52
SCN2BO60939 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.54□□□□□ -1.52
SCN2BO60939 BX276092.6-201ENST00000430476 250 ntBASIC5.54□□□□□ -1.52
SCN2BO60939 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SCN2BO60939 REREP2Y-201ENST00000439103 200 ntBASIC5.54□□□□□ -1.52
SCN2BO60939 RPS23P9-201ENST00000448848 438 ntBASIC5.54□□□□□ -1.52
SCN2BO60939 BX276092.8-201ENST00000455722 250 ntBASIC5.54□□□□□ -1.52
SCN2BO60939 AC112484.3-201ENST00000505910 329 ntBASIC5.54□□□□□ -1.52
SCN2BO60939 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.54□□□□□ -1.52
SCN2BO60939 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.54□□□□□ -1.52
SCN2BO60939 AP003033.2-201ENST00000528901 805 ntBASIC5.54□□□□□ -1.52
SCN2BO60939 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SCN2BO60939 OR4A41P-201ENST00000533053 928 ntBASIC5.54□□□□□ -1.52
SCN2BO60939 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.54□□□□□ -1.52
SCN2BO60939 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.54□□□□□ -1.52
SCN2BO60939 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.54□□□□□ -1.52
SCN2BO60939 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.54□□□□□ -1.52
SCN2BO60939 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.54□□□□□ -1.52
SCN2BO60939 AC091078.2-201ENST00000557145 559 ntBASIC5.54□□□□□ -1.52
SCN2BO60939 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.54□□□□□ -1.52
SCN2BO60939 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.54□□□□□ -1.52
SCN2BO60939 ZNF322P1-201ENST00000568013 1209 ntBASIC5.54□□□□□ -1.52
SCN2BO60939 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.54□□□□□ -1.52
SCN2BO60939 TXNP4-201ENST00000575018 310 ntBASIC5.54□□□□□ -1.52
SCN2BO60939 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.54□□□□□ -1.52
SCN2BO60939 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SCN2BO60939 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.54□□□□□ -1.52
SCN2BO60939 uc_338.29-201ENST00000615099 168 ntBASIC5.54□□□□□ -1.52
SCN2BO60939 AC015712.7-201ENST00000615211 635 ntBASIC5.54□□□□□ -1.52
SCN2BO60939 uc_338.31-201ENST00000615595 186 ntBASIC5.54□□□□□ -1.52
SCN2BO60939 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.54□□□□□ -1.52
SCN2BO60939 AC048341.3-201ENST00000619323 491 ntBASIC5.54□□□□□ -1.52
SCN2BO60939 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SCN2BO60939 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SCN2BO60939 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
SCN2BO60939 CAP1P2-201ENST00000417455 1409 ntBASIC5.54□□□□□ -1.52
SCN2BO60939 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SCN2BO60939 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SCN2BO60939 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
SCN2BO60939 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.54□□□□□ -1.52
SCN2BO60939 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SCN2BO60939 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SCN2BO60939 AC008627.1-201ENST00000517511 1704 ntBASIC5.54□□□□□ -1.52
SCN2BO60939 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
SCN2BO60939 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.54□□□□□ -1.52
SCN2BO60939 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SCN2BO60939 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SCN2BO60939 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SCN2BO60939 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SCN2BO60939 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.53□□□□□ -1.52
SCN2BO60939 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.53□□□□□ -1.52
SCN2BO60939 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms