Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC4.91□□□□□ -1.62
SDCBPO00560 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC4.91□□□□□ -1.62
SDCBPO00560 AC110056.1-201ENST00000525759 911 ntBASIC4.91□□□□□ -1.62
SDCBPO00560 AL121594.2-201ENST00000541658 472 ntBASIC4.91□□□□□ -1.62
SDCBPO00560 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC4.91□□□□□ -1.62
SDCBPO00560 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC4.91□□□□□ -1.62
SDCBPO00560 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.91□□□□□ -1.62
SDCBPO00560 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC4.91□□□□□ -1.62
SDCBPO00560 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.91□□□□□ -1.62
SDCBPO00560 MIR3154-201ENST00000577829 84 ntBASIC4.91□□□□□ -1.62
SDCBPO00560 MIR4701-201ENST00000583094 63 ntBASIC4.91□□□□□ -1.62
SDCBPO00560 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SDCBPO00560 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC4.91□□□□□ -1.62
SDCBPO00560 APOC2-205ENST00000592257 444 ntTSL 3 BASIC4.91□□□□□ -1.62
SDCBPO00560 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.91□□□□□ -1.62
SDCBPO00560 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.91□□□□□ -1.62
SDCBPO00560 AL445670.1-201ENST00000618889 801 ntBASIC4.91□□□□□ -1.62
SDCBPO00560 TEX41-271ENST00000628213 993 ntTSL 5 BASIC4.91□□□□□ -1.62
SDCBPO00560 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SDCBPO00560 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.91□□□□□ -1.62
SDCBPO00560 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.91□□□□□ -1.62
SDCBPO00560 FBXL21-201ENST00000297158 1305 ntBASIC4.91□□□□□ -1.62
SDCBPO00560 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.91□□□□□ -1.62
SDCBPO00560 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SDCBPO00560 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SDCBPO00560 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.91□□□□□ -1.62
SDCBPO00560 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.91□□□□□ -1.62
SDCBPO00560 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
SDCBPO00560 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
SDCBPO00560 BX284613.1-201ENST00000452221 1641 ntBASIC4.9□□□□□ -1.62
SDCBPO00560 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.9□□□□□ -1.62
SDCBPO00560 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
SDCBPO00560 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SDCBPO00560 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.9□□□□□ -1.62
SDCBPO00560 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SDCBPO00560 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
SDCBPO00560 AC012254.3-201ENST00000591183 2117 ntBASIC4.9□□□□□ -1.62
SDCBPO00560 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
SDCBPO00560 PARP4P2-201ENST00000446672 3326 ntBASIC4.9□□□□□ -1.62
SDCBPO00560 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SDCBPO00560 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SDCBPO00560 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
SDCBPO00560 RNA5SP232-201ENST00000364144 119 ntBASIC4.9□□□□□ -1.63
SDCBPO00560 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SDCBPO00560 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC4.9□□□□□ -1.63
SDCBPO00560 RNU6-316P-201ENST00000391027 107 ntBASIC4.9□□□□□ -1.63
SDCBPO00560 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SDCBPO00560 GCNT1P4-201ENST00000404096 329 ntBASIC4.9□□□□□ -1.63
SDCBPO00560 RN7SKP86-201ENST00000410454 332 ntBASIC4.9□□□□□ -1.63
SDCBPO00560 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.9□□□□□ -1.63
SDCBPO00560 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC4.9□□□□□ -1.63
SDCBPO00560 FAM183DP-201ENST00000421987 399 ntBASIC4.9□□□□□ -1.63
SDCBPO00560 KATNBL1P2-201ENST00000433311 835 ntBASIC4.9□□□□□ -1.63
SDCBPO00560 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC4.9□□□□□ -1.63
SDCBPO00560 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.9□□□□□ -1.63
SDCBPO00560 RPS7P3-201ENST00000443360 580 ntBASIC4.9□□□□□ -1.63
SDCBPO00560 RPL6P30-201ENST00000443382 862 ntBASIC4.9□□□□□ -1.63
SDCBPO00560 RPL5P7-201ENST00000444235 813 ntBASIC4.9□□□□□ -1.63
SDCBPO00560 AL445466.1-201ENST00000448432 357 ntBASIC4.9□□□□□ -1.63
SDCBPO00560 RPS23P9-201ENST00000448848 438 ntBASIC4.9□□□□□ -1.63
SDCBPO00560 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC4.9□□□□□ -1.63
SDCBPO00560 AC004129.2-201ENST00000457229 287 ntBASIC4.9□□□□□ -1.63
SDCBPO00560 RNU1-88P-201ENST00000459274 128 ntBASIC4.9□□□□□ -1.63
SDCBPO00560 RN7SL197P-201ENST00000466981 299 ntBASIC4.9□□□□□ -1.63
SDCBPO00560 AC092865.4-201ENST00000477936 615 ntBASIC4.9□□□□□ -1.63
SDCBPO00560 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SDCBPO00560 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.9□□□□□ -1.63
SDCBPO00560 PRMT5P1-201ENST00000514351 598 ntBASIC4.9□□□□□ -1.63
SDCBPO00560 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.9□□□□□ -1.63
SDCBPO00560 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4.9□□□□□ -1.63
SDCBPO00560 FAU-203ENST00000525297 355 ntTSL 5 BASIC4.9□□□□□ -1.63
SDCBPO00560 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SDCBPO00560 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.9□□□□□ -1.63
SDCBPO00560 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.9□□□□□ -1.63
SDCBPO00560 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SDCBPO00560 AC002519.2-203ENST00000567043 837 ntBASIC4.9□□□□□ -1.63
SDCBPO00560 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SDCBPO00560 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.9□□□□□ -1.63
SDCBPO00560 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC4.9□□□□□ -1.63
SDCBPO00560 AL021918.2-201ENST00000613415 194 ntBASIC4.9□□□□□ -1.63
SDCBPO00560 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SDCBPO00560 TEX41-293ENST00000630451 690 ntTSL 5 BASIC4.9□□□□□ -1.63
SDCBPO00560 AC073488.3-201ENST00000631611 778 ntBASIC4.9□□□□□ -1.63
SDCBPO00560 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SDCBPO00560 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC4.9□□□□□ -1.63
SDCBPO00560 AL161912.4-201ENST00000623889 2468 ntBASIC4.9□□□□□ -1.63
SDCBPO00560 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
SDCBPO00560 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC4.9□□□□□ -1.63
SDCBPO00560 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SDCBPO00560 MFSD8-219ENST00000641228 2559 ntBASIC4.9□□□□□ -1.63
SDCBPO00560 ABCC13-202ENST00000463099 3842 ntBASIC4.9□□□□□ -1.63
SDCBPO00560 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SDCBPO00560 HSPD1P9-201ENST00000420325 1636 ntBASIC4.9□□□□□ -1.63
SDCBPO00560 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
SDCBPO00560 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
SDCBPO00560 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
SDCBPO00560 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SDCBPO00560 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.89□□□□□ -1.63
SDCBPO00560 AC013268.3-201ENST00000262716 2324 ntBASIC4.89□□□□□ -1.63
SDCBPO00560 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms