Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 AC009097.3-201ENST00000563557 1018 ntBASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 AC023825.1-201ENST00000566704 1030 ntBASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 MRPS21P8-201ENST00000569196 235 ntBASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 NPIPB1P-202ENST00000588786 828 ntBASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 AC010620.1-201ENST00000601088 1102 ntBASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 AL133247.2-201ENST00000603236 482 ntBASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 AC090425.2-201ENST00000608818 501 ntBASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 AL049536.1-201ENST00000625043 744 ntBASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 AL133243.4-201ENST00000623116 3109 ntBASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDLIM7Q9NR12 ZNF840P-201ENST00000504759 1996 ntBASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 CDY11P-201ENST00000447168 1651 ntBASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 MTCO1P28-201ENST00000574177 1528 ntBASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 AC008549.2-201ENST00000333482 706 ntBASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 RNU1-46P-201ENST00000384425 164 ntBASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 AC241520.1-201ENST00000422654 1099 ntBASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 PTP4A1P7-201ENST00000423476 514 ntBASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 AC094019.1-201ENST00000434678 472 ntBASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 AL645936.1-201ENST00000441979 518 ntBASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 AC073072.2-201ENST00000447425 348 ntBASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 AC023194.2-201ENST00000465398 406 ntBASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 EIF1P7-201ENST00000487533 337 ntBASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 HMGB1P38-201ENST00000490557 577 ntBASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 MTND4P2-201ENST00000507767 1203 ntBASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 SUMO2P7-201ENST00000511179 285 ntBASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 Y_RNA.655-201ENST00000515919 96 ntBASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 SNORD46.2-201ENST00000516021 102 ntBASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 RNU6-1334P-201ENST00000516032 105 ntBASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 RNU6-276P-201ENST00000516114 96 ntBASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 RN7SL475P-201ENST00000583379 298 ntBASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 TEX41-218ENST00000596540 882 ntTSL 5 BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 AC119751.7-201ENST00000600494 245 ntBASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 AL022067.1-201ENST00000602426 454 ntBASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 AC020765.1-201ENST00000604296 328 ntBASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 AC079298.2-201ENST00000623885 459 ntBASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.22□□□□□ -1.25
PDLIM7Q9NR12 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms