Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC9.94□□□□□ -0.82
RTN4Q9NQC3 AF186996.3-201ENST00000509527 964 ntBASIC9.94□□□□□ -0.82
RTN4Q9NQC3 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC9.94□□□□□ -0.82
RTN4Q9NQC3 AC114781.4-201ENST00000513707 639 ntBASIC9.94□□□□□ -0.82
RTN4Q9NQC3 RNU2-46P-201ENST00000517038 113 ntBASIC9.94□□□□□ -0.82
RTN4Q9NQC3 AC011726.2-201ENST00000522547 508 ntTSL 3 BASIC9.94□□□□□ -0.82
RTN4Q9NQC3 FAM92A1P1-201ENST00000528023 890 ntBASIC9.94□□□□□ -0.82
RTN4Q9NQC3 EGLN3P1-201ENST00000541727 720 ntBASIC9.94□□□□□ -0.82
RTN4Q9NQC3 ANP32BP1-202ENST00000568553 737 ntBASIC9.94□□□□□ -0.82
RTN4Q9NQC3 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC9.94□□□□□ -0.82
RTN4Q9NQC3 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC9.94□□□□□ -0.82
RTN4Q9NQC3 AC005197.1-201ENST00000597769 683 ntTSL 5 BASIC9.94□□□□□ -0.82
RTN4Q9NQC3 COX6CP4-201ENST00000605798 228 ntBASIC9.94□□□□□ -0.82
RTN4Q9NQC3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC9.94□□□□□ -0.82
RTN4Q9NQC3 AC005291.2-201ENST00000609088 523 ntTSL 4 BASIC9.94□□□□□ -0.82
RTN4Q9NQC3 AC017083.3-201ENST00000609955 700 ntBASIC9.94□□□□□ -0.82
RTN4Q9NQC3 AP000457.1-201ENST00000620221 378 ntBASIC9.94□□□□□ -0.82
RTN4Q9NQC3 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC9.94□□□□□ -0.82
RTN4Q9NQC3 SLC7A6-201ENST00000219343 6251 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
RTN4Q9NQC3 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
RTN4Q9NQC3 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
RTN4Q9NQC3 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
RTN4Q9NQC3 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC9.94□□□□□ -0.82
RTN4Q9NQC3 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
RTN4Q9NQC3 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
RTN4Q9NQC3 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
RTN4Q9NQC3 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
RTN4Q9NQC3 AC011978.2-201ENST00000569835 2054 ntBASIC9.94□□□□□ -0.82
RTN4Q9NQC3 CFAP58-202ENST00000369704 3313 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
RTN4Q9NQC3 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 AC025574.1-201ENST00000554784 1653 ntBASIC9.93□□□□□ -0.82
RTN4Q9NQC3 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 FBXW11P1-201ENST00000393804 1474 ntBASIC9.93□□□□□ -0.82
RTN4Q9NQC3 LINC00598-213ENST00000637438 1456 ntTSL 5 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 FIGNL1-214ENST00000617389 3259 ntAPPRIS P1 TSL 4 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 AP3M1-202ENST00000372745 2320 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 ZFP57-201ENST00000376881 1359 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 SCGB1D1-201ENST00000306238 453 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 GHRH-203ENST00000373614 570 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 HBE1-202ENST00000380237 913 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 CALM2P3-201ENST00000400429 449 ntBASIC9.93□□□□□ -0.82
RTN4Q9NQC3 MIR1272-201ENST00000408106 129 ntBASIC9.93□□□□□ -0.82
RTN4Q9NQC3 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 USP9YP27-201ENST00000418455 438 ntBASIC9.93□□□□□ -0.82
RTN4Q9NQC3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 ADGRF5P1-201ENST00000435875 1135 ntBASIC9.93□□□□□ -0.82
RTN4Q9NQC3 AC136896.1-201ENST00000438334 547 ntBASIC9.93□□□□□ -0.82
RTN4Q9NQC3 AC104088.1-201ENST00000445613 510 ntTSL 5 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 AC069285.1-201ENST00000450891 419 ntTSL 3 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 C1DP4-201ENST00000455429 424 ntBASIC9.93□□□□□ -0.82
RTN4Q9NQC3 CEACAM22P-203ENST00000455455 545 ntTSL 4 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 AC092965.1-201ENST00000469748 490 ntBASIC9.93□□□□□ -0.82
RTN4Q9NQC3 TRAF3IP3-212ENST00000477431 791 ntTSL 3 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 RPL12P37-201ENST00000486874 495 ntBASIC9.93□□□□□ -0.82
RTN4Q9NQC3 AC008897.2-201ENST00000501886 527 ntTSL 4 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 AC105914.1-201ENST00000511798 226 ntBASIC9.93□□□□□ -0.82
RTN4Q9NQC3 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 PTTG3P-201ENST00000521862 606 ntBASIC9.93□□□□□ -0.82
RTN4Q9NQC3 AC116456.1-202ENST00000528151 597 ntTSL 4 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 AP000763.1-201ENST00000539481 325 ntBASIC9.93□□□□□ -0.82
RTN4Q9NQC3 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 AC020612.1-201ENST00000547655 541 ntBASIC9.93□□□□□ -0.82
RTN4Q9NQC3 OAS1-211ENST00000553185 664 ntTSL 2 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 AL132719.1-201ENST00000554515 423 ntTSL 3 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 AC073878.1-201ENST00000567503 474 ntTSL 3 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 AC004253.2-201ENST00000585025 397 ntTSL 3 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 AC008752.3-201ENST00000588113 712 ntBASIC9.93□□□□□ -0.82
RTN4Q9NQC3 AC008770.1-208ENST00000591838 430 ntTSL 5 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 AC012507.3-201ENST00000603556 477 ntBASIC9.93□□□□□ -0.82
RTN4Q9NQC3 AL161734.1-201ENST00000609720 557 ntBASIC9.93□□□□□ -0.82
RTN4Q9NQC3 BX510359.8-201ENST00000617713 296 ntBASIC9.93□□□□□ -0.82
RTN4Q9NQC3 uc_338.24-201ENST00000617802 182 ntBASIC9.93□□□□□ -0.82
RTN4Q9NQC3 SYN3-213ENST00000619146 561 ntTSL 5 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 AC005703.5-201ENST00000623654 555 ntBASIC9.93□□□□□ -0.82
RTN4Q9NQC3 AC015978.1-201ENST00000635343 890 ntBASIC9.93□□□□□ -0.82
RTN4Q9NQC3 ABI1-208ENST00000376160 3515 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 FAM149B1P1-201ENST00000533428 1610 ntBASIC9.93□□□□□ -0.82
RTN4Q9NQC3 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTN4Q9NQC3 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 842.2 ms