Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 AC104966.1-201ENST00000467010 1464 ntBASIC6.36□□□□□ -1.39
USP29Q9HBJ7 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.36□□□□□ -1.39
USP29Q9HBJ7 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 AC123769.1-201ENST00000530992 3192 ntBASIC6.36□□□□□ -1.39
USP29Q9HBJ7 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 RPL11P4-201ENST00000332269 436 ntBASIC6.36□□□□□ -1.39
USP29Q9HBJ7 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 AC021876.1-201ENST00000425959 359 ntBASIC6.36□□□□□ -1.39
USP29Q9HBJ7 RPSAP65-201ENST00000429660 595 ntBASIC6.36□□□□□ -1.39
USP29Q9HBJ7 UBE2V1P6-201ENST00000430840 422 ntBASIC6.36□□□□□ -1.39
USP29Q9HBJ7 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 OR52I1-201ENST00000450052 1050 ntBASIC6.36□□□□□ -1.39
USP29Q9HBJ7 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 AC104629.1-201ENST00000494226 508 ntBASIC6.36□□□□□ -1.39
USP29Q9HBJ7 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 SNX18P24-201ENST00000505249 671 ntBASIC6.36□□□□□ -1.39
USP29Q9HBJ7 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 GLYATL1P2-202ENST00000588046 902 ntBASIC6.36□□□□□ -1.39
USP29Q9HBJ7 AC090330.1-201ENST00000588646 764 ntBASIC6.36□□□□□ -1.39
USP29Q9HBJ7 AC020916.2-201ENST00000591242 360 ntBASIC6.36□□□□□ -1.39
USP29Q9HBJ7 AC107993.1-201ENST00000591343 684 ntBASIC6.36□□□□□ -1.39
USP29Q9HBJ7 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 AP003117.1-201ENST00000602771 554 ntBASIC6.36□□□□□ -1.39
USP29Q9HBJ7 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 AC022306.3-201ENST00000619930 550 ntBASIC6.36□□□□□ -1.39
USP29Q9HBJ7 AL137067.2-201ENST00000621202 131 ntBASIC6.36□□□□□ -1.39
USP29Q9HBJ7 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 AL359091.1-201ENST00000449048 1734 ntBASIC6.36□□□□□ -1.39
USP29Q9HBJ7 AL033543.1-201ENST00000623440 13454 ntBASIC6.36□□□□□ -1.39
USP29Q9HBJ7 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
USP29Q9HBJ7 CASC19-246ENST00000641625 1606 ntBASIC6.36□□□□□ -1.39
USP29Q9HBJ7 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
USP29Q9HBJ7 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
USP29Q9HBJ7 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.35□□□□□ -1.39
USP29Q9HBJ7 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC6.35□□□□□ -1.39
USP29Q9HBJ7 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.35□□□□□ -1.39
USP29Q9HBJ7 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
USP29Q9HBJ7 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
USP29Q9HBJ7 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
USP29Q9HBJ7 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
USP29Q9HBJ7 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
USP29Q9HBJ7 Y_RNA.62-201ENST00000362840 99 ntBASIC6.35□□□□□ -1.39
USP29Q9HBJ7 RN7SKP275-201ENST00000364626 301 ntBASIC6.35□□□□□ -1.39
USP29Q9HBJ7 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
USP29Q9HBJ7 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.35□□□□□ -1.39
USP29Q9HBJ7 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.35□□□□□ -1.39
USP29Q9HBJ7 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.35□□□□□ -1.39
USP29Q9HBJ7 AL445528.1-201ENST00000426330 420 ntBASIC6.35□□□□□ -1.39
USP29Q9HBJ7 AC016027.5-201ENST00000427227 210 ntBASIC6.35□□□□□ -1.39
USP29Q9HBJ7 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.35□□□□□ -1.39
USP29Q9HBJ7 IGLV3-4-201ENST00000432300 244 ntBASIC6.35□□□□□ -1.39
USP29Q9HBJ7 PPIAP10-201ENST00000438675 458 ntBASIC6.35□□□□□ -1.39
USP29Q9HBJ7 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.35□□□□□ -1.39
USP29Q9HBJ7 MTND5P8-201ENST00000449817 1083 ntBASIC6.35□□□□□ -1.39
USP29Q9HBJ7 AL133351.3-201ENST00000454998 193 ntBASIC6.35□□□□□ -1.39
USP29Q9HBJ7 AC002075.1-201ENST00000457396 676 ntBASIC6.35□□□□□ -1.39
USP29Q9HBJ7 AL445687.2-201ENST00000458156 728 ntBASIC6.35□□□□□ -1.39
USP29Q9HBJ7 RNU7-157P-201ENST00000459600 66 ntBASIC6.35□□□□□ -1.39
USP29Q9HBJ7 NDUFA5P5-201ENST00000468361 342 ntBASIC6.35□□□□□ -1.39
USP29Q9HBJ7 DEFB109A-201ENST00000482450 265 ntBASIC6.35□□□□□ -1.39
USP29Q9HBJ7 AP002453.1-201ENST00000492327 668 ntBASIC6.35□□□□□ -1.39
USP29Q9HBJ7 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.35□□□□□ -1.39
USP29Q9HBJ7 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.35□□□□□ -1.39
USP29Q9HBJ7 UGT2A3P7-201ENST00000510485 734 ntBASIC6.35□□□□□ -1.39
USP29Q9HBJ7 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.35□□□□□ -1.39
USP29Q9HBJ7 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.35□□□□□ -1.39
USP29Q9HBJ7 RN7SKP5-201ENST00000517045 272 ntBASIC6.35□□□□□ -1.39
USP29Q9HBJ7 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC6.35□□□□□ -1.39
USP29Q9HBJ7 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.35□□□□□ -1.39
USP29Q9HBJ7 MTND1P6-201ENST00000523621 946 ntBASIC6.35□□□□□ -1.39
USP29Q9HBJ7 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.35□□□□□ -1.39
USP29Q9HBJ7 MTND5P21-201ENST00000531961 522 ntBASIC6.35□□□□□ -1.39
USP29Q9HBJ7 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.35□□□□□ -1.39
USP29Q9HBJ7 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.35□□□□□ -1.39
USP29Q9HBJ7 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.35□□□□□ -1.39
USP29Q9HBJ7 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.35□□□□□ -1.39
USP29Q9HBJ7 RNU4ATAC-201ENST00000580972 127 ntBASIC6.35□□□□□ -1.39
USP29Q9HBJ7 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms