Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SSX3Q99909 AL354766.1-201ENST00000423396 542 ntBASIC5.26□□□□□ -1.57
SSX3Q99909 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.26□□□□□ -1.57
SSX3Q99909 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.26□□□□□ -1.57
SSX3Q99909 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC5.26□□□□□ -1.57
SSX3Q99909 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.26□□□□□ -1.57
SSX3Q99909 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.26□□□□□ -1.57
SSX3Q99909 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.26□□□□□ -1.57
SSX3Q99909 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.26□□□□□ -1.57
SSX3Q99909 RN7SL168P-201ENST00000463821 279 ntBASIC5.26□□□□□ -1.57
SSX3Q99909 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.26□□□□□ -1.57
SSX3Q99909 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.26□□□□□ -1.57
SSX3Q99909 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.26□□□□□ -1.57
SSX3Q99909 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.26□□□□□ -1.57
SSX3Q99909 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.26□□□□□ -1.57
SSX3Q99909 SCARNA5-201ENST00000516201 276 ntBASIC5.26□□□□□ -1.57
SSX3Q99909 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.26□□□□□ -1.57
SSX3Q99909 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.26□□□□□ -1.57
SSX3Q99909 AC023968.1-201ENST00000560719 475 ntBASIC5.26□□□□□ -1.57
SSX3Q99909 MTND2P13-201ENST00000577438 1039 ntBASIC5.26□□□□□ -1.57
SSX3Q99909 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.26□□□□□ -1.57
SSX3Q99909 FAM106CP-201ENST00000582212 507 ntBASIC5.26□□□□□ -1.57
SSX3Q99909 AC010503.3-201ENST00000594355 540 ntBASIC5.26□□□□□ -1.57
SSX3Q99909 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.26□□□□□ -1.57
SSX3Q99909 AC004805.3-201ENST00000603178 310 ntBASIC5.26□□□□□ -1.57
SSX3Q99909 BUB1P1-201ENST00000603541 607 ntBASIC5.26□□□□□ -1.57
SSX3Q99909 AC090953.1-201ENST00000604305 1092 ntBASIC5.26□□□□□ -1.57
SSX3Q99909 AL359091.2-201ENST00000609303 556 ntBASIC5.26□□□□□ -1.57
SSX3Q99909 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.26□□□□□ -1.57
SSX3Q99909 AC008833.1-201ENST00000611633 691 ntBASIC5.26□□□□□ -1.57
SSX3Q99909 uc_338.29-201ENST00000615099 168 ntBASIC5.26□□□□□ -1.57
SSX3Q99909 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
SSX3Q99909 AL122023.1-201ENST00000622847 530 ntBASIC5.26□□□□□ -1.57
SSX3Q99909 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SSX3Q99909 AC114546.4-201ENST00000624413 369 ntBASIC5.26□□□□□ -1.57
SSX3Q99909 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.26□□□□□ -1.57
SSX3Q99909 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSX3Q99909 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSX3Q99909 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.26□□□□□ -1.57
SSX3Q99909 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
SSX3Q99909 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SSX3Q99909 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSX3Q99909 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSX3Q99909 AL359976.1-201ENST00000418655 3528 ntBASIC5.26□□□□□ -1.57
SSX3Q99909 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.25□□□□□ -1.57
SSX3Q99909 AC019072.1-201ENST00000604535 1551 ntBASIC5.25□□□□□ -1.57
SSX3Q99909 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SSX3Q99909 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.25□□□□□ -1.57
SSX3Q99909 AC107021.2-201ENST00000567714 2095 ntBASIC5.25□□□□□ -1.57
SSX3Q99909 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.25□□□□□ -1.57
SSX3Q99909 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SSX3Q99909 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SSX3Q99909 CASC19-228ENST00000641414 1684 ntBASIC5.25□□□□□ -1.57
SSX3Q99909 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SSX3Q99909 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.25□□□□□ -1.57
SSX3Q99909 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SSX3Q99909 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
SSX3Q99909 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SSX3Q99909 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SSX3Q99909 RN7SKP171-201ENST00000364417 303 ntBASIC5.25□□□□□ -1.57
SSX3Q99909 RNU6-891P-201ENST00000384280 111 ntBASIC5.25□□□□□ -1.57
SSX3Q99909 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SSX3Q99909 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SSX3Q99909 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SSX3Q99909 YY1P1-201ENST00000427625 668 ntBASIC5.25□□□□□ -1.57
SSX3Q99909 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.25□□□□□ -1.57
SSX3Q99909 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.25□□□□□ -1.57
SSX3Q99909 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.25□□□□□ -1.57
SSX3Q99909 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.25□□□□□ -1.57
SSX3Q99909 OR11I1P-201ENST00000486033 954 ntBASIC5.25□□□□□ -1.57
SSX3Q99909 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.25□□□□□ -1.57
SSX3Q99909 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.25□□□□□ -1.57
SSX3Q99909 AC113367.2-201ENST00000505749 160 ntBASIC5.25□□□□□ -1.57
SSX3Q99909 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SSX3Q99909 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC5.25□□□□□ -1.57
SSX3Q99909 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.25□□□□□ -1.57
SSX3Q99909 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SSX3Q99909 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.25□□□□□ -1.57
SSX3Q99909 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.25□□□□□ -1.57
SSX3Q99909 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
SSX3Q99909 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.25□□□□□ -1.57
SSX3Q99909 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SSX3Q99909 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.25□□□□□ -1.57
SSX3Q99909 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SSX3Q99909 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SSX3Q99909 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.25□□□□□ -1.57
SSX3Q99909 AL589863.1-201ENST00000595383 631 ntBASIC5.25□□□□□ -1.57
SSX3Q99909 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.25□□□□□ -1.57
SSX3Q99909 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.25□□□□□ -1.57
SSX3Q99909 AP001264.1-201ENST00000620602 703 ntBASIC5.25□□□□□ -1.57
SSX3Q99909 AC018692.2-201ENST00000624130 348 ntBASIC5.25□□□□□ -1.57
SSX3Q99909 AC010325.3-201ENST00000641084 394 ntBASIC5.25□□□□□ -1.57
SSX3Q99909 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.25□□□□□ -1.57
SSX3Q99909 PCAT14-202ENST00000627127 3935 ntBASIC5.25□□□□□ -1.57
SSX3Q99909 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.25□□□□□ -1.57
SSX3Q99909 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.25□□□□□ -1.57
SSX3Q99909 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SSX3Q99909 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
SSX3Q99909 AC010624.4-201ENST00000597606 1351 ntBASIC5.25□□□□□ -1.57
SSX3Q99909 AC022325.1-201ENST00000502748 2199 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 150.2 ms