Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC9.41□□□□□ -0.9
IFT140Q96RY7 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC9.41□□□□□ -0.9
IFT140Q96RY7 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
IFT140Q96RY7 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC9.41□□□□□ -0.9
IFT140Q96RY7 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
IFT140Q96RY7 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC9.41□□□□□ -0.9
IFT140Q96RY7 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
IFT140Q96RY7 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
IFT140Q96RY7 AC232271.1-201ENST00000602455 2715 ntBASIC9.41□□□□□ -0.9
IFT140Q96RY7 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
IFT140Q96RY7 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
IFT140Q96RY7 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC9.41□□□□□ -0.9
IFT140Q96RY7 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
IFT140Q96RY7 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
IFT140Q96RY7 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
IFT140Q96RY7 RN7SKP113-201ENST00000363891 295 ntBASIC9.4□□□□□ -0.9
IFT140Q96RY7 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC9.4□□□□□ -0.9
IFT140Q96RY7 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC9.4□□□□□ -0.9
IFT140Q96RY7 HNRNPDLP2-201ENST00000455248 751 ntBASIC9.4□□□□□ -0.9
IFT140Q96RY7 MIR4311-201ENST00000580794 100 ntBASIC9.4□□□□□ -0.9
IFT140Q96RY7 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC9.4□□□□□ -0.9
IFT140Q96RY7 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC9.4□□□□□ -0.9
IFT140Q96RY7 AC087283.1-201ENST00000604029 1074 ntBASIC9.4□□□□□ -0.9
IFT140Q96RY7 TEX41-254ENST00000626394 423 ntTSL 5 BASIC9.4□□□□□ -0.9
IFT140Q96RY7 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
IFT140Q96RY7 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
IFT140Q96RY7 MFSD8-219ENST00000641228 2559 ntBASIC9.4□□□□□ -0.9
IFT140Q96RY7 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC9.4□□□□□ -0.9
IFT140Q96RY7 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
IFT140Q96RY7 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC9.4□□□□□ -0.9
IFT140Q96RY7 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
IFT140Q96RY7 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
IFT140Q96RY7 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
IFT140Q96RY7 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC9.4□□□□□ -0.9
IFT140Q96RY7 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC9.4□□□□□ -0.9
IFT140Q96RY7 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
IFT140Q96RY7 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC9.4□□□□□ -0.9
IFT140Q96RY7 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
IFT140Q96RY7 INTS6P1-201ENST00000504674 2530 ntBASIC9.4□□□□□ -0.91
IFT140Q96RY7 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
IFT140Q96RY7 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
IFT140Q96RY7 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
IFT140Q96RY7 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
IFT140Q96RY7 SNORA51.8-201ENST00000384234 132 ntBASIC9.4□□□□□ -0.91
IFT140Q96RY7 RPS4XP9-201ENST00000405151 780 ntBASIC9.4□□□□□ -0.91
IFT140Q96RY7 RNU6ATAC21P-201ENST00000408656 126 ntBASIC9.4□□□□□ -0.91
IFT140Q96RY7 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC9.4□□□□□ -0.91
IFT140Q96RY7 AC002075.1-201ENST00000457396 676 ntBASIC9.4□□□□□ -0.91
IFT140Q96RY7 AL603882.1-201ENST00000463059 681 ntBASIC9.4□□□□□ -0.91
IFT140Q96RY7 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
IFT140Q96RY7 RN7SL459P-201ENST00000481078 302 ntBASIC9.4□□□□□ -0.91
IFT140Q96RY7 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC9.4□□□□□ -0.91
IFT140Q96RY7 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC9.4□□□□□ -0.91
IFT140Q96RY7 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC9.4□□□□□ -0.91
IFT140Q96RY7 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC9.4□□□□□ -0.91
IFT140Q96RY7 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC9.4□□□□□ -0.91
IFT140Q96RY7 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC9.4□□□□□ -0.91
IFT140Q96RY7 AC244502.2-201ENST00000543361 851 ntBASIC9.4□□□□□ -0.91
IFT140Q96RY7 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC9.4□□□□□ -0.91
IFT140Q96RY7 AC209154.1-201ENST00000582156 337 ntBASIC9.4□□□□□ -0.91
IFT140Q96RY7 AC027334.1-201ENST00000603257 310 ntBASIC9.4□□□□□ -0.91
IFT140Q96RY7 AC073869.10-201ENST00000642016 354 ntBASIC9.4□□□□□ -0.91
IFT140Q96RY7 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
IFT140Q96RY7 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC9.39□□□□□ -0.91
IFT140Q96RY7 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
IFT140Q96RY7 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC9.39□□□□□ -0.91
IFT140Q96RY7 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
IFT140Q96RY7 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
IFT140Q96RY7 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC9.39□□□□□ -0.91
IFT140Q96RY7 HSPA8P14-201ENST00000552265 1805 ntBASIC9.39□□□□□ -0.91
IFT140Q96RY7 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC9.39□□□□□ -0.91
IFT140Q96RY7 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC9.39□□□□□ -0.91
IFT140Q96RY7 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC9.39□□□□□ -0.91
IFT140Q96RY7 TNPO1P2-201ENST00000426249 2665 ntBASIC9.39□□□□□ -0.91
IFT140Q96RY7 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC9.39□□□□□ -0.91
IFT140Q96RY7 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
IFT140Q96RY7 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
IFT140Q96RY7 RPL23AP18-201ENST00000416139 468 ntBASIC9.39□□□□□ -0.91
IFT140Q96RY7 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC9.39□□□□□ -0.91
IFT140Q96RY7 AC127381.1-201ENST00000555979 939 ntBASIC9.39□□□□□ -0.91
IFT140Q96RY7 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC9.39□□□□□ -0.91
IFT140Q96RY7 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC9.39□□□□□ -0.91
IFT140Q96RY7 CASC22-201ENST00000569713 386 ntTSL 5 BASIC9.39□□□□□ -0.91
IFT140Q96RY7 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC9.39□□□□□ -0.91
IFT140Q96RY7 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC9.39□□□□□ -0.91
IFT140Q96RY7 MIR7703-201ENST00000620784 77 ntBASIC9.39□□□□□ -0.91
IFT140Q96RY7 AP000346.3-201ENST00000622821 210 ntBASIC9.39□□□□□ -0.91
IFT140Q96RY7 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
IFT140Q96RY7 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC9.39□□□□□ -0.91
IFT140Q96RY7 AF131215.2-201ENST00000531549 1710 ntBASIC9.39□□□□□ -0.91
IFT140Q96RY7 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
IFT140Q96RY7 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
IFT140Q96RY7 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC9.38□□□□□ -0.91
IFT140Q96RY7 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
IFT140Q96RY7 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
IFT140Q96RY7 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC9.38□□□□□ -0.91
IFT140Q96RY7 AC126755.2-208ENST00000327792 462 ntBASIC9.38□□□□□ -0.91
IFT140Q96RY7 AC138969.1-213ENST00000331436 462 ntBASIC9.38□□□□□ -0.91
IFT140Q96RY7 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
IFT140Q96RY7 RNU1-149P-201ENST00000390870 161 ntBASIC9.38□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms