Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 MTATP6P1-201ENST00000514057 681 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 SSU72P6-201ENST00000532644 488 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 AC016144.1-201ENST00000548175 1087 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 AL135978.1-201ENST00000553618 1266 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 MIR4801-201ENST00000582704 82 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 MIR5682-201ENST00000584864 76 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 MTCO2P22-201ENST00000603246 681 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 AC010738.1-201ENST00000604970 987 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 AC093635.1-201ENST00000609028 555 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 AC245407.2-201ENST00000614199 451 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 AC005277.2-201ENST00000617898 390 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 AL158062.1-201ENST00000619632 745 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 AC005753.1-201ENST00000623837 618 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 CASC19-212ENST00000641153 1287 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 CASC19-232ENST00000641480 1244 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 AC034111.1-201ENST00000562143 3770 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 CDY19P-201ENST00000411668 1613 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 CDY7P-201ENST00000429883 1604 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 CDY18P-201ENST00000438294 1609 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 SGO1P2-201ENST00000429458 1589 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 AC007342.7-201ENST00000624610 2337 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 AC006042.3-201ENST00000454684 1469 ntBASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.6□□□□□ -1.35
PTCHD1Q96NR3 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 AC111188.2-201ENST00000529697 1387 ntBASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 OR2AH1P-202ENST00000641232 2744 ntBASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 RNA5SP172-201ENST00000365061 118 ntBASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 AL359715.1-201ENST00000404330 555 ntBASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 Y_RNA.604-201ENST00000410574 102 ntBASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 RNU4-74P-201ENST00000411280 161 ntBASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 RAD23BP2-201ENST00000416003 1207 ntBASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 AC023128.2-201ENST00000420880 1223 ntBASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 SCP2-206ENST00000430330 938 ntTSL 2 BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 PUDPP2-201ENST00000431423 643 ntBASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 AL365220.1-201ENST00000432923 399 ntBASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 MORF4L1P5-201ENST00000433352 961 ntBASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 AL356133.1-201ENST00000444762 372 ntBASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 BMI1P1-201ENST00000445879 941 ntBASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 OR51P1P-201ENST00000447547 942 ntBASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 SLAMF6P1-201ENST00000451067 602 ntBASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 AL133480.2-201ENST00000456723 487 ntBASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 AC135999.1-201ENST00000478962 479 ntBASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 RN7SL705P-201ENST00000481678 294 ntBASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 RBMS2P1-201ENST00000525031 1226 ntBASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 MRPS21P9-201ENST00000571150 257 ntBASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 EIF4A3P1-201ENST00000578499 647 ntBASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 RN7SL426P-201ENST00000579106 295 ntBASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 MIR378H-201ENST00000579966 83 ntBASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 OR7E19P-202ENST00000589942 844 ntBASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 AC011447.2-201ENST00000592921 283 ntBASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC6.59□□□□□ -1.35
PTCHD1Q96NR3 AC239868.4-201ENST00000608318 671 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms