Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CCDC7Q96M83 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC8.17□□□□□ -1.1
CCDC7Q96M83 AC092070.2-203ENST00000598377 3644 ntBASIC8.17□□□□□ -1.1
CCDC7Q96M83 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CCDC7Q96M83 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
CCDC7Q96M83 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC8.17□□□□□ -1.1
CCDC7Q96M83 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
CCDC7Q96M83 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC8.16□□□□□ -1.1
CCDC7Q96M83 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC7Q96M83 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC8.16□□□□□ -1.1
CCDC7Q96M83 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
CCDC7Q96M83 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC7Q96M83 CPS1-IT1-201ENST00000628368 2306 ntBASIC8.16□□□□□ -1.1
CCDC7Q96M83 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC7Q96M83 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
CCDC7Q96M83 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
CCDC7Q96M83 OR3A2-201ENST00000408891 1076 ntBASIC8.16□□□□□ -1.1
CCDC7Q96M83 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC8.16□□□□□ -1.1
CCDC7Q96M83 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC8.16□□□□□ -1.1
CCDC7Q96M83 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC8.16□□□□□ -1.1
CCDC7Q96M83 WBP1LP3-201ENST00000523033 208 ntBASIC8.16□□□□□ -1.1
CCDC7Q96M83 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC8.16□□□□□ -1.1
CCDC7Q96M83 AC022404.1-201ENST00000555320 273 ntBASIC8.16□□□□□ -1.1
CCDC7Q96M83 AL356801.1-201ENST00000559320 294 ntBASIC8.16□□□□□ -1.1
CCDC7Q96M83 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC8.16□□□□□ -1.1
CCDC7Q96M83 AC145423.1-201ENST00000605712 336 ntBASIC8.16□□□□□ -1.1
CCDC7Q96M83 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
CCDC7Q96M83 AP002833.3-201ENST00000625075 2265 ntBASIC8.16□□□□□ -1.1
CCDC7Q96M83 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC8.16□□□□□ -1.1
CCDC7Q96M83 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
CCDC7Q96M83 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
CCDC7Q96M83 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC7Q96M83 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
CCDC7Q96M83 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
CCDC7Q96M83 MIR375-201ENST00000362103 64 ntBASIC8.15□□□□□ -1.1
CCDC7Q96M83 RN7SKP128-201ENST00000364270 303 ntBASIC8.15□□□□□ -1.1
CCDC7Q96M83 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC8.15□□□□□ -1.1
CCDC7Q96M83 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC8.15□□□□□ -1.1
CCDC7Q96M83 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC8.15□□□□□ -1.1
CCDC7Q96M83 RSU1P1-201ENST00000453416 441 ntBASIC8.15□□□□□ -1.1
CCDC7Q96M83 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC8.15□□□□□ -1.1
CCDC7Q96M83 AC006530.1-201ENST00000555980 571 ntBASIC8.15□□□□□ -1.1
CCDC7Q96M83 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC8.15□□□□□ -1.1
CCDC7Q96M83 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC8.15□□□□□ -1.1
CCDC7Q96M83 AC022919.1-201ENST00000624979 626 ntBASIC8.15□□□□□ -1.1
CCDC7Q96M83 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC8.15□□□□□ -1.1
CCDC7Q96M83 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
CCDC7Q96M83 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC8.15□□□□□ -1.1
CCDC7Q96M83 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
CCDC7Q96M83 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
CCDC7Q96M83 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
CCDC7Q96M83 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
CCDC7Q96M83 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
CCDC7Q96M83 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC8.14□□□□□ -1.11
CCDC7Q96M83 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
CCDC7Q96M83 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
CCDC7Q96M83 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
CCDC7Q96M83 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CCDC7Q96M83 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
CCDC7Q96M83 RNA5SP132-201ENST00000364725 118 ntBASIC8.14□□□□□ -1.11
CCDC7Q96M83 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CCDC7Q96M83 MIR937-201ENST00000401271 86 ntBASIC8.14□□□□□ -1.11
CCDC7Q96M83 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC8.14□□□□□ -1.11
CCDC7Q96M83 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC8.14□□□□□ -1.11
CCDC7Q96M83 YWHAEP1-201ENST00000453697 763 ntBASIC8.14□□□□□ -1.11
CCDC7Q96M83 ST13P12-201ENST00000508958 1094 ntBASIC8.14□□□□□ -1.11
CCDC7Q96M83 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CCDC7Q96M83 SNORA70.20-201ENST00000516848 126 ntBASIC8.14□□□□□ -1.11
CCDC7Q96M83 AL121594.2-201ENST00000541658 472 ntBASIC8.14□□□□□ -1.11
CCDC7Q96M83 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CCDC7Q96M83 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
CCDC7Q96M83 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC8.14□□□□□ -1.11
CCDC7Q96M83 SDR42E1P1-201ENST00000611327 477 ntBASIC8.14□□□□□ -1.11
CCDC7Q96M83 FGG-205ENST00000407946 1636 ntTSL 5 BASIC8.14□□□□□ -1.11
CCDC7Q96M83 MFSD8-219ENST00000641228 2559 ntBASIC8.14□□□□□ -1.11
CCDC7Q96M83 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC8.14□□□□□ -1.11
CCDC7Q96M83 AC079753.1-201ENST00000623243 3868 ntBASIC8.14□□□□□ -1.11
CCDC7Q96M83 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CCDC7Q96M83 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC8.14□□□□□ -1.11
CCDC7Q96M83 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC8.14□□□□□ -1.11
CCDC7Q96M83 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
CCDC7Q96M83 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC8.14□□□□□ -1.11
CCDC7Q96M83 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CCDC7Q96M83 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CCDC7Q96M83 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC8.14□□□□□ -1.11
CCDC7Q96M83 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CCDC7Q96M83 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC8.13□□□□□ -1.11
CCDC7Q96M83 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
CCDC7Q96M83 WDR95P-201ENST00000425638 1542 ntBASIC8.13□□□□□ -1.11
CCDC7Q96M83 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CCDC7Q96M83 FUNDC2P3-201ENST00000334716 533 ntBASIC8.13□□□□□ -1.11
CCDC7Q96M83 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC8.13□□□□□ -1.11
CCDC7Q96M83 DNAJA1P3-201ENST00000399417 1194 ntBASIC8.13□□□□□ -1.11
CCDC7Q96M83 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC8.13□□□□□ -1.11
CCDC7Q96M83 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC8.13□□□□□ -1.11
CCDC7Q96M83 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC8.13□□□□□ -1.11
CCDC7Q96M83 RPL12P39-201ENST00000455456 496 ntBASIC8.13□□□□□ -1.11
CCDC7Q96M83 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CCDC7Q96M83 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC8.13□□□□□ -1.11
CCDC7Q96M83 AP000864.1-201ENST00000609424 650 ntBASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms