Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 AC007342.5-201ENST00000571340 2142 ntBASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 MIR744-201ENST00000578242 98 ntBASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 AC012254.3-201ENST00000591183 2117 ntBASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 AC068768.2-201ENST00000602352 343 ntBASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 AL360012.1-201ENST00000602813 131 ntBASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 uc_338.26-201ENST00000612659 160 ntBASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 MIR6721-201ENST00000617181 87 ntBASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 AL445670.1-201ENST00000618889 801 ntBASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 AC087516.1-201ENST00000561236 2428 ntBASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 OR7E25P-201ENST00000344844 931 ntBASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 DPPA2P2-201ENST00000418220 897 ntBASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 AL691447.1-201ENST00000419456 387 ntBASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 AL445928.1-201ENST00000435545 222 ntBASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 AC096775.1-201ENST00000437724 448 ntBASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 AL138787.1-202ENST00000437804 898 ntBASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 AL353662.1-201ENST00000439099 327 ntBASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 RSU1P1-201ENST00000453416 441 ntBASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 OR7L1P-201ENST00000456181 380 ntBASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 PFN1P6-201ENST00000476786 399 ntBASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 AC093719.1-201ENST00000480427 441 ntBASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 AC098583.1-201ENST00000480875 255 ntBASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 AC090058.1-201ENST00000498788 435 ntBASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 CCNHP1-201ENST00000513311 678 ntBASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 AC078899.1-201ENST00000521432 1185 ntBASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 AP001804.2-201ENST00000533932 910 ntBASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 LINC00556-201ENST00000569603 412 ntBASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 AC092681.3-201ENST00000609463 678 ntBASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 AC015660.5-201ENST00000623238 564 ntBASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 AC020633.1-201ENST00000468439 2247 ntBASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
PDLIM5Q96HC4 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
PDLIM5Q96HC4 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.84□□□□□ -1.48
PDLIM5Q96HC4 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
PDLIM5Q96HC4 AP000432.2-201ENST00000624164 2048 ntBASIC5.84□□□□□ -1.48
PDLIM5Q96HC4 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
PDLIM5Q96HC4 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.84□□□□□ -1.48
PDLIM5Q96HC4 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.48
PDLIM5Q96HC4 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
PDLIM5Q96HC4 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
PDLIM5Q96HC4 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDLIM5Q96HC4 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.83□□□□□ -1.48
PDLIM5Q96HC4 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.83□□□□□ -1.48
PDLIM5Q96HC4 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDLIM5Q96HC4 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
PDLIM5Q96HC4 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PDLIM5Q96HC4 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDLIM5Q96HC4 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDLIM5Q96HC4 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.83□□□□□ -1.48
PDLIM5Q96HC4 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
PDLIM5Q96HC4 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.83□□□□□ -1.48
PDLIM5Q96HC4 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms