Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 TDGP1-201ENST00000543961 1229 ntBASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 AL121594.4-201ENST00000556211 1196 ntBASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 AC027281.1-201ENST00000574178 758 ntBASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 MIR212-201ENST00000586026 110 ntBASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 AL158050.2-201ENST00000605336 568 ntBASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 AC089999.3-201ENST00000622440 577 ntBASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 AC016583.1-201ENST00000624221 2431 ntBASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 AC015799.1-201ENST00000622996 3122 ntBASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 AP000641.1-201ENST00000531988 1639 ntBASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 AC087565.3-202ENST00000642085 1603 ntBASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 SNORA64.3-201ENST00000365647 134 ntBASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 AL050305.1-201ENST00000399993 1230 ntBASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 AL589994.1-201ENST00000404962 340 ntBASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 AL359885.1-201ENST00000415786 903 ntBASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 AC011242.1-201ENST00000433596 1158 ntBASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 AL022324.2-201ENST00000434827 780 ntBASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 PA2G4P1-201ENST00000442248 1197 ntBASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 TXNP2-201ENST00000443918 295 ntBASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 POU5F1P5-201ENST00000445059 658 ntBASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 RNU7-157P-201ENST00000459600 66 ntBASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 RN7SL502P-201ENST00000481857 290 ntBASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 TOMM22P4-201ENST00000511318 336 ntBASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 AP001372.4-201ENST00000524889 472 ntBASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 AC005000.1-201ENST00000536192 288 ntBASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 AL049779.3-201ENST00000557141 606 ntBASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 AC027279.1-201ENST00000568885 4284 ntBASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 SNORA74.4-201ENST00000607595 199 ntBASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 uc_338.26-201ENST00000612659 160 ntBASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 AC005156.1-201ENST00000613371 573 ntBASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 AL352984.2-202ENST00000613699 155 ntBASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 MAPK10-270ENST00000641102 3538 ntBASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.29□□□□□ -1.4
ATG4AQ8WYN0 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.28□□□□□ -1.4
ATG4AQ8WYN0 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
ATG4AQ8WYN0 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.28□□□□□ -1.4
ATG4AQ8WYN0 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.28□□□□□ -1.4
ATG4AQ8WYN0 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ATG4AQ8WYN0 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.28□□□□□ -1.4
ATG4AQ8WYN0 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms