Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 MTND4P12-201ENST00000498999 1377 ntBASIC6.57□□□□□ -1.36
ATG4DQ86TL0 DYNC1I2P1-201ENST00000435916 1838 ntBASIC6.57□□□□□ -1.36
ATG4DQ86TL0 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 AC008033.1-201ENST00000216407 1162 ntBASIC6.57□□□□□ -1.36
ATG4DQ86TL0 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 RNA5SP396-201ENST00000364834 120 ntBASIC6.57□□□□□ -1.36
ATG4DQ86TL0 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 Y_RNA.554-201ENST00000384672 102 ntBASIC6.57□□□□□ -1.36
ATG4DQ86TL0 TAF9BP2-201ENST00000400856 499 ntBASIC6.57□□□□□ -1.36
ATG4DQ86TL0 AL356057.2-201ENST00000403318 432 ntBASIC6.57□□□□□ -1.36
ATG4DQ86TL0 ARAFP1-201ENST00000422172 605 ntBASIC6.57□□□□□ -1.36
ATG4DQ86TL0 TRIM60P10Y-201ENST00000425589 751 ntBASIC6.57□□□□□ -1.36
ATG4DQ86TL0 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 AC105052.2-201ENST00000434317 794 ntBASIC6.57□□□□□ -1.36
ATG4DQ86TL0 NQO1-204ENST00000439109 924 ntTSL 2 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 GTF3AP5-201ENST00000442645 697 ntBASIC6.57□□□□□ -1.36
ATG4DQ86TL0 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 MTND1P18-201ENST00000448191 573 ntBASIC6.57□□□□□ -1.36
ATG4DQ86TL0 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 KATNBL1P6-201ENST00000453433 915 ntBASIC6.57□□□□□ -1.36
ATG4DQ86TL0 PSPC1P2-201ENST00000455130 225 ntBASIC6.57□□□□□ -1.36
ATG4DQ86TL0 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 RN7SL688P-201ENST00000471754 275 ntBASIC6.57□□□□□ -1.36
ATG4DQ86TL0 TUBBP11-201ENST00000472255 252 ntBASIC6.57□□□□□ -1.36
ATG4DQ86TL0 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 RN7SL152P-201ENST00000484176 298 ntBASIC6.57□□□□□ -1.36
ATG4DQ86TL0 OR7E157P-201ENST00000494376 911 ntBASIC6.57□□□□□ -1.36
ATG4DQ86TL0 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 SEPT10P1-201ENST00000517342 1162 ntBASIC6.57□□□□□ -1.36
ATG4DQ86TL0 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 CENPUP1-201ENST00000526649 1202 ntBASIC6.57□□□□□ -1.36
ATG4DQ86TL0 OR4A21P-201ENST00000532759 944 ntBASIC6.57□□□□□ -1.36
ATG4DQ86TL0 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 AL138976.2-201ENST00000563989 694 ntBASIC6.57□□□□□ -1.36
ATG4DQ86TL0 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 MIR3671-201ENST00000580455 88 ntBASIC6.57□□□□□ -1.36
ATG4DQ86TL0 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 Z98200.1-201ENST00000607298 470 ntBASIC6.57□□□□□ -1.36
ATG4DQ86TL0 AL159169.3-201ENST00000608871 561 ntBASIC6.57□□□□□ -1.36
ATG4DQ86TL0 AL139123.1-201ENST00000612008 430 ntBASIC6.57□□□□□ -1.36
ATG4DQ86TL0 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 HOTTIP_2.1-201ENST00000616633 376 ntBASIC6.57□□□□□ -1.36
ATG4DQ86TL0 AC006338.1-201ENST00000618453 749 ntBASIC6.57□□□□□ -1.36
ATG4DQ86TL0 DUXAP9-208ENST00000622815 614 ntBASIC6.57□□□□□ -1.36
ATG4DQ86TL0 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 AL596275.2-207ENST00000641188 675 ntBASIC6.57□□□□□ -1.36
ATG4DQ86TL0 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 BX322650.1-201ENST00000332359 2143 ntBASIC6.56□□□□□ -1.36
ATG4DQ86TL0 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 AC123769.2-201ENST00000624332 5984 ntBASIC6.56□□□□□ -1.36
ATG4DQ86TL0 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
ATG4DQ86TL0 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms