Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 SLC2A14-215ENST00000542546 3120 ntTSL 5 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 HELQ-201ENST00000295488 3579 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VARS2Q5ST30 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VARS2Q5ST30 ASNSP3-201ENST00000451989 1306 ntBASIC8.84□□□□□ -0.99
VARS2Q5ST30 UIMC1-211ENST00000510698 1334 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VARS2Q5ST30 NMD3P1-201ENST00000439704 1488 ntBASIC8.84□□□□□ -0.99
VARS2Q5ST30 ZSCAN32-201ENST00000304926 3027 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VARS2Q5ST30 PLCE1-AS2-202ENST00000432782 1612 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VARS2Q5ST30 GNAI1-205ENST00000457358 1633 ntTSL 2 BASIC8.84□□□□□ -0.99
VARS2Q5ST30 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VARS2Q5ST30 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC8.84□□□□□ -0.99
VARS2Q5ST30 AC013444.1-201ENST00000428909 1904 ntBASIC8.84□□□□□ -0.99
VARS2Q5ST30 SP140L-201ENST00000243810 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
VARS2Q5ST30 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VARS2Q5ST30 LGALS8-202ENST00000323938 1855 ntTSL 5 BASIC8.84□□□□□ -0.99
VARS2Q5ST30 CTH-201ENST00000346806 1196 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VARS2Q5ST30 DYNLRB1-202ENST00000357156 675 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VARS2Q5ST30 RNU6-774P-201ENST00000363238 107 ntBASIC8.84□□□□□ -0.99
VARS2Q5ST30 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC8.84□□□□□ -0.99
VARS2Q5ST30 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
VARS2Q5ST30 Y_RNA.447-201ENST00000384184 113 ntBASIC8.84□□□□□ -0.99
VARS2Q5ST30 MIR128-2-201ENST00000384893 84 ntBASIC8.84□□□□□ -0.99
VARS2Q5ST30 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC8.84□□□□□ -0.99
VARS2Q5ST30 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
VARS2Q5ST30 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VARS2Q5ST30 AC025750.1-201ENST00000399891 379 ntBASIC8.84□□□□□ -0.99
VARS2Q5ST30 RNU6-1068P-201ENST00000410958 103 ntBASIC8.84□□□□□ -0.99
VARS2Q5ST30 OR6E1P-201ENST00000414424 923 ntBASIC8.84□□□□□ -0.99
VARS2Q5ST30 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC8.84□□□□□ -0.99
VARS2Q5ST30 ZEB2-AS1-201ENST00000421083 453 ntTSL 2 BASIC8.84□□□□□ -0.99
VARS2Q5ST30 KRTAP9-11P-201ENST00000431013 525 ntBASIC8.84□□□□□ -0.99
VARS2Q5ST30 SUMO2P8-201ENST00000434672 286 ntBASIC8.84□□□□□ -0.99
VARS2Q5ST30 AC243962.1-201ENST00000441512 579 ntBASIC8.84□□□□□ -0.99
VARS2Q5ST30 LDB2-202ENST00000441778 2476 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VARS2Q5ST30 AC012501.1-201ENST00000454312 555 ntTSL 4 BASIC8.84□□□□□ -0.99
VARS2Q5ST30 PHYKPL-205ENST00000476170 824 ntTSL 4 BASIC8.84□□□□□ -0.99
VARS2Q5ST30 AC105910.1-201ENST00000482585 483 ntBASIC8.84□□□□□ -0.99
VARS2Q5ST30 AC025164.1-201ENST00000496249 478 ntBASIC8.84□□□□□ -0.99
VARS2Q5ST30 RNU6-635P-201ENST00000516651 102 ntBASIC8.84□□□□□ -0.99
VARS2Q5ST30 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC8.84□□□□□ -0.99
VARS2Q5ST30 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC8.84□□□□□ -0.99
VARS2Q5ST30 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC8.84□□□□□ -0.99
VARS2Q5ST30 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC8.84□□□□□ -0.99
VARS2Q5ST30 AP004245.1-201ENST00000530434 259 ntBASIC8.84□□□□□ -0.99
VARS2Q5ST30 RGS4-209ENST00000531057 544 ntTSL 4 BASIC8.84□□□□□ -0.99
VARS2Q5ST30 AC138123.3-201ENST00000551928 791 ntTSL 5 BASIC8.84□□□□□ -0.99
VARS2Q5ST30 AC005230.1-201ENST00000555418 285 ntBASIC8.84□□□□□ -0.99
VARS2Q5ST30 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC8.84□□□□□ -0.99
VARS2Q5ST30 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC8.84□□□□□ -0.99
VARS2Q5ST30 LCMT1-AS1-202ENST00000563962 766 ntTSL 3 BASIC8.84□□□□□ -0.99
VARS2Q5ST30 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC8.84□□□□□ -0.99
VARS2Q5ST30 AC093826.2-201ENST00000579042 108 ntBASIC8.84□□□□□ -0.99
VARS2Q5ST30 ARGFXP2-201ENST00000579304 949 ntBASIC8.84□□□□□ -0.99
VARS2Q5ST30 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC8.84□□□□□ -0.99
VARS2Q5ST30 AL589863.1-201ENST00000595383 631 ntBASIC8.84□□□□□ -0.99
VARS2Q5ST30 DYNLL1P1-201ENST00000595442 269 ntBASIC8.84□□□□□ -0.99
VARS2Q5ST30 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC8.84□□□□□ -0.99
VARS2Q5ST30 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC8.84□□□□□ -0.99
VARS2Q5ST30 SUMO2P14-201ENST00000604488 293 ntBASIC8.84□□□□□ -0.99
VARS2Q5ST30 ATP1B3P1-201ENST00000605365 821 ntBASIC8.84□□□□□ -0.99
VARS2Q5ST30 AC048344.3-201ENST00000605512 251 ntBASIC8.84□□□□□ -0.99
VARS2Q5ST30 AC107871.2-201ENST00000612894 502 ntBASIC8.84□□□□□ -0.99
VARS2Q5ST30 GALNT15-206ENST00000617544 2775 ntTSL 5 BASIC8.84□□□□□ -0.99
VARS2Q5ST30 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VARS2Q5ST30 MRAS-211ENST00000621127 3801 ntTSL 5 BASIC8.84□□□□□ -0.99
VARS2Q5ST30 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC8.84□□□□□ -0.99
VARS2Q5ST30 AC132825.6-201ENST00000638861 357 ntBASIC8.84□□□□□ -0.99
VARS2Q5ST30 PAX6-259ENST00000639916 2622 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VARS2Q5ST30 ALPK1-203ENST00000458497 5410 ntAPPRIS P3 TSL 5 BASIC8.84□□□□□ -0.99
VARS2Q5ST30 ZNF33A-208ENST00000628825 2854 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
VARS2Q5ST30 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VARS2Q5ST30 PIGN-230ENST00000638977 4601 ntTSL 5 BASIC8.84□□□□□ -0.99
VARS2Q5ST30 SLC17A2-202ENST00000360488 2270 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
VARS2Q5ST30 ZC3H15-201ENST00000337859 2138 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VARS2Q5ST30 IL5RA-203ENST00000383846 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
VARS2Q5ST30 UGT2B4-206ENST00000512583 1836 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VARS2Q5ST30 AP4S1-204ENST00000542754 4243 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VARS2Q5ST30 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VARS2Q5ST30 ZNF665-201ENST00000396424 4159 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
VARS2Q5ST30 GPBP1-208ENST00000514387 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
VARS2Q5ST30 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
VARS2Q5ST30 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
VARS2Q5ST30 TCF7L2-221ENST00000545257 2160 ntTSL 1 (best) BASIC8.83□□□□□ -1
VARS2Q5ST30 AC105101.1-201ENST00000623698 2873 ntTSL 5 BASIC8.83□□□□□ -1
VARS2Q5ST30 IST1-226ENST00000606369 3583 ntTSL 2 BASIC8.83□□□□□ -1
VARS2Q5ST30 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
VARS2Q5ST30 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC8.83□□□□□ -1
VARS2Q5ST30 NBPF25P-201ENST00000606775 2019 ntBASIC8.83□□□□□ -1
VARS2Q5ST30 ACTR6-202ENST00000546902 1877 ntTSL 2 BASIC8.83□□□□□ -1
VARS2Q5ST30 AC124319.2-201ENST00000575034 3651 ntTSL 2 BASIC8.83□□□□□ -1
VARS2Q5ST30 PAPD4-204ENST00000453514 3523 ntAPPRIS P3 TSL 5 BASIC8.83□□□□□ -1
VARS2Q5ST30 DDIAS-211ENST00000533655 3533 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
VARS2Q5ST30 CYP4A11-203ENST00000371905 1725 ntTSL 1 (best) BASIC8.83□□□□□ -1
VARS2Q5ST30 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
VARS2Q5ST30 TTLL7-IT1-201ENST00000455929 2921 ntTSL 1 (best) BASIC8.83□□□□□ -1
VARS2Q5ST30 AC125232.1-201ENST00000452554 1408 ntBASIC8.83□□□□□ -1
VARS2Q5ST30 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC8.83□□□□□ -1
VARS2Q5ST30 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
VARS2Q5ST30 C2CD3-201ENST00000313663 6283 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms