Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SCN1BQ07699 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.46□□□□□ -1.54
SCN1BQ07699 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SCN1BQ07699 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.45□□□□□ -1.54
SCN1BQ07699 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SCN1BQ07699 AL136984.1-201ENST00000607611 1893 ntBASIC5.45□□□□□ -1.54
SCN1BQ07699 SAGE3P-201ENST00000619800 1635 ntBASIC5.45□□□□□ -1.54
SCN1BQ07699 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.45□□□□□ -1.54
SCN1BQ07699 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SCN1BQ07699 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.45□□□□□ -1.54
SCN1BQ07699 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SCN1BQ07699 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SCN1BQ07699 SMG1P5-202ENST00000529428 4219 ntBASIC5.45□□□□□ -1.54
SCN1BQ07699 SMG1P2-201ENST00000566127 4221 ntBASIC5.45□□□□□ -1.54
SCN1BQ07699 RNU1-146P-201ENST00000364015 165 ntBASIC5.45□□□□□ -1.54
SCN1BQ07699 RNU4-7P-201ENST00000364758 141 ntBASIC5.45□□□□□ -1.54
SCN1BQ07699 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SCN1BQ07699 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SCN1BQ07699 RPL5P20-201ENST00000403848 896 ntBASIC5.45□□□□□ -1.54
SCN1BQ07699 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.45□□□□□ -1.54
SCN1BQ07699 RNA5SP231-201ENST00000410496 138 ntBASIC5.45□□□□□ -1.54
SCN1BQ07699 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC5.45□□□□□ -1.54
SCN1BQ07699 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.45□□□□□ -1.54
SCN1BQ07699 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.45□□□□□ -1.54
SCN1BQ07699 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.45□□□□□ -1.54
SCN1BQ07699 UBBP5-201ENST00000446970 266 ntBASIC5.45□□□□□ -1.54
SCN1BQ07699 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.45□□□□□ -1.54
SCN1BQ07699 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.45□□□□□ -1.54
SCN1BQ07699 AC112187.1-201ENST00000455837 479 ntBASIC5.45□□□□□ -1.54
SCN1BQ07699 RPSAP39-201ENST00000467439 883 ntBASIC5.45□□□□□ -1.54
SCN1BQ07699 AC131392.1-201ENST00000506490 633 ntBASIC5.45□□□□□ -1.54
SCN1BQ07699 OSTC-204ENST00000512478 663 ntTSL 5 BASIC5.45□□□□□ -1.54
SCN1BQ07699 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.45□□□□□ -1.54
SCN1BQ07699 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.45□□□□□ -1.54
SCN1BQ07699 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.45□□□□□ -1.54
SCN1BQ07699 AC074029.2-201ENST00000551045 634 ntBASIC5.45□□□□□ -1.54
SCN1BQ07699 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.45□□□□□ -1.54
SCN1BQ07699 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.45□□□□□ -1.54
SCN1BQ07699 AC068408.1-201ENST00000577406 1144 ntBASIC5.45□□□□□ -1.54
SCN1BQ07699 MIR378H-201ENST00000579966 83 ntBASIC5.45□□□□□ -1.54
SCN1BQ07699 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.45□□□□□ -1.54
SCN1BQ07699 AC060780.2-201ENST00000589047 198 ntBASIC5.45□□□□□ -1.54
SCN1BQ07699 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.45□□□□□ -1.54
SCN1BQ07699 AC245052.7-201ENST00000601161 359 ntBASIC5.45□□□□□ -1.54
SCN1BQ07699 AC019257.2-201ENST00000605539 497 ntBASIC5.45□□□□□ -1.54
SCN1BQ07699 AC073575.2-201ENST00000614212 627 ntBASIC5.45□□□□□ -1.54
SCN1BQ07699 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SCN1BQ07699 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC5.45□□□□□ -1.54
SCN1BQ07699 MIR6085-201ENST00000618314 110 ntBASIC5.45□□□□□ -1.54
SCN1BQ07699 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SCN1BQ07699 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SCN1BQ07699 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.45□□□□□ -1.54
SCN1BQ07699 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
SCN1BQ07699 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SCN1BQ07699 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SCN1BQ07699 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SCN1BQ07699 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SCN1BQ07699 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SCN1BQ07699 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SCN1BQ07699 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SCN1BQ07699 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SCN1BQ07699 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
SCN1BQ07699 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC5.45□□□□□ -1.54
SCN1BQ07699 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
SCN1BQ07699 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SCN1BQ07699 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SCN1BQ07699 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.44□□□□□ -1.54
SCN1BQ07699 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SCN1BQ07699 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.44□□□□□ -1.54
SCN1BQ07699 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
SCN1BQ07699 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.44□□□□□ -1.54
SCN1BQ07699 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SCN1BQ07699 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.44□□□□□ -1.54
SCN1BQ07699 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.44□□□□□ -1.54
SCN1BQ07699 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SCN1BQ07699 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SCN1BQ07699 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SCN1BQ07699 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SCN1BQ07699 MIR421-201ENST00000365696 85 ntBASIC5.44□□□□□ -1.54
SCN1BQ07699 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.44□□□□□ -1.54
SCN1BQ07699 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SCN1BQ07699 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SCN1BQ07699 SNORA7A-201ENST00000384765 139 ntBASIC5.44□□□□□ -1.54
SCN1BQ07699 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SCN1BQ07699 RNA5SP155-201ENST00000411154 129 ntBASIC5.44□□□□□ -1.54
SCN1BQ07699 AL512504.1-201ENST00000415494 778 ntBASIC5.44□□□□□ -1.54
SCN1BQ07699 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SCN1BQ07699 OR51A6P-201ENST00000418680 1004 ntBASIC5.44□□□□□ -1.54
SCN1BQ07699 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC5.44□□□□□ -1.54
SCN1BQ07699 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.44□□□□□ -1.54
SCN1BQ07699 AC099670.2-201ENST00000435130 321 ntBASIC5.44□□□□□ -1.54
SCN1BQ07699 AC093716.1-201ENST00000435923 377 ntBASIC5.44□□□□□ -1.54
SCN1BQ07699 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.44□□□□□ -1.54
SCN1BQ07699 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.44□□□□□ -1.54
SCN1BQ07699 RPSAP40-201ENST00000442343 891 ntBASIC5.44□□□□□ -1.54
SCN1BQ07699 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC5.44□□□□□ -1.54
SCN1BQ07699 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.44□□□□□ -1.54
SCN1BQ07699 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SCN1BQ07699 VPS25P1-201ENST00000455691 508 ntBASIC5.44□□□□□ -1.54
SCN1BQ07699 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms