Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
GABPAQ06546 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.85□□□□□ -1.31
GABPAQ06546 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.85□□□□□ -1.31
GABPAQ06546 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.85□□□□□ -1.31
GABPAQ06546 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
GABPAQ06546 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
GABPAQ06546 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
GABPAQ06546 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
GABPAQ06546 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
GABPAQ06546 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
GABPAQ06546 AL360271.1-201ENST00000395679 510 ntBASIC6.84□□□□□ -1.31
GABPAQ06546 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.84□□□□□ -1.31
GABPAQ06546 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.84□□□□□ -1.31
GABPAQ06546 AC015983.1-201ENST00000441577 373 ntBASIC6.84□□□□□ -1.31
GABPAQ06546 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.84□□□□□ -1.31
GABPAQ06546 AC005297.1-201ENST00000444765 862 ntBASIC6.84□□□□□ -1.31
GABPAQ06546 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.84□□□□□ -1.31
GABPAQ06546 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.84□□□□□ -1.31
GABPAQ06546 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.84□□□□□ -1.31
GABPAQ06546 MRE11P1-201ENST00000464884 2127 ntBASIC6.84□□□□□ -1.31
GABPAQ06546 RPL32P33-201ENST00000487023 394 ntBASIC6.84□□□□□ -1.31
GABPAQ06546 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.84□□□□□ -1.31
GABPAQ06546 AC073610.1-201ENST00000489971 396 ntBASIC6.84□□□□□ -1.31
GABPAQ06546 OR7E157P-201ENST00000494376 911 ntBASIC6.84□□□□□ -1.31
GABPAQ06546 RN7SL466P-201ENST00000497546 295 ntBASIC6.84□□□□□ -1.31
GABPAQ06546 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.84□□□□□ -1.31
GABPAQ06546 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.84□□□□□ -1.31
GABPAQ06546 ATP5LP3-201ENST00000514223 304 ntBASIC6.84□□□□□ -1.31
GABPAQ06546 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.84□□□□□ -1.31
GABPAQ06546 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.84□□□□□ -1.31
GABPAQ06546 MIR4260-201ENST00000583107 67 ntBASIC6.84□□□□□ -1.31
GABPAQ06546 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.84□□□□□ -1.31
GABPAQ06546 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.84□□□□□ -1.31
GABPAQ06546 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
GABPAQ06546 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
GABPAQ06546 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.84□□□□□ -1.31
GABPAQ06546 MFSD8-219ENST00000641228 2559 ntBASIC6.84□□□□□ -1.31
GABPAQ06546 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
GABPAQ06546 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
GABPAQ06546 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.84□□□□□ -1.32
GABPAQ06546 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
GABPAQ06546 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
GABPAQ06546 ZNF812P-201ENST00000457674 1694 ntBASIC6.84□□□□□ -1.32
GABPAQ06546 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
GABPAQ06546 AC027279.4-201ENST00000624371 2072 ntBASIC6.83□□□□□ -1.32
GABPAQ06546 AC241584.2-201ENST00000637142 2090 ntBASIC6.83□□□□□ -1.32
GABPAQ06546 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
GABPAQ06546 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
GABPAQ06546 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
GABPAQ06546 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
GABPAQ06546 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
GABPAQ06546 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
GABPAQ06546 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
GABPAQ06546 SRRM1P3-201ENST00000426911 2678 ntBASIC6.83□□□□□ -1.32
GABPAQ06546 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.83□□□□□ -1.32
GABPAQ06546 SNORA70H-201ENST00000383910 135 ntBASIC6.83□□□□□ -1.32
GABPAQ06546 SNORA70J-201ENST00000384182 135 ntBASIC6.83□□□□□ -1.32
GABPAQ06546 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.83□□□□□ -1.32
GABPAQ06546 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.83□□□□□ -1.32
GABPAQ06546 OR5W1P-201ENST00000423705 938 ntBASIC6.83□□□□□ -1.32
GABPAQ06546 AK3P5-201ENST00000432033 519 ntBASIC6.83□□□□□ -1.32
GABPAQ06546 EEF1B2P6-201ENST00000445713 673 ntBASIC6.83□□□□□ -1.32
GABPAQ06546 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.83□□□□□ -1.32
GABPAQ06546 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.83□□□□□ -1.32
GABPAQ06546 RN7SL72P-201ENST00000460697 269 ntBASIC6.83□□□□□ -1.32
GABPAQ06546 SCARNA21.2-201ENST00000516600 166 ntBASIC6.83□□□□□ -1.32
GABPAQ06546 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.83□□□□□ -1.32
GABPAQ06546 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
GABPAQ06546 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.83□□□□□ -1.32
GABPAQ06546 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.83□□□□□ -1.32
GABPAQ06546 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.83□□□□□ -1.32
GABPAQ06546 IGBP1P1-201ENST00000554337 1009 ntBASIC6.83□□□□□ -1.32
GABPAQ06546 MIR1273E-201ENST00000581165 102 ntBASIC6.83□□□□□ -1.32
GABPAQ06546 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.83□□□□□ -1.32
GABPAQ06546 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.83□□□□□ -1.32
GABPAQ06546 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.83□□□□□ -1.32
GABPAQ06546 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
GABPAQ06546 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
GABPAQ06546 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
GABPAQ06546 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.83□□□□□ -1.32
GABPAQ06546 GTF2IP4-201ENST00000453092 2054 ntBASIC6.83□□□□□ -1.32
GABPAQ06546 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
GABPAQ06546 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
GABPAQ06546 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
GABPAQ06546 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
GABPAQ06546 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
GABPAQ06546 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
GABPAQ06546 AC023632.6-201ENST00000624338 2177 ntBASIC6.82□□□□□ -1.32
GABPAQ06546 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.82□□□□□ -1.32
GABPAQ06546 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
GABPAQ06546 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
GABPAQ06546 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
GABPAQ06546 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
GABPAQ06546 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.82□□□□□ -1.32
GABPAQ06546 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
GABPAQ06546 LINC02019-201ENST00000608605 2060 ntBASIC6.82□□□□□ -1.32
GABPAQ06546 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
GABPAQ06546 RNA5SP131-201ENST00000365452 119 ntBASIC6.82□□□□□ -1.32
GABPAQ06546 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
GABPAQ06546 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms