Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
H3F3AP84243 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
H3F3AP84243 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
H3F3AP84243 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.29□□□□□ -1.56
H3F3AP84243 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
H3F3AP84243 AL078595.2-201ENST00000605309 1780 ntBASIC5.29□□□□□ -1.56
H3F3AP84243 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
H3F3AP84243 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
H3F3AP84243 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
H3F3AP84243 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.29□□□□□ -1.56
H3F3AP84243 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
H3F3AP84243 AL049634.1-201ENST00000453770 1720 ntBASIC5.29□□□□□ -1.56
H3F3AP84243 AC027088.4-201ENST00000611559 1947 ntBASIC5.29□□□□□ -1.56
H3F3AP84243 AC005224.3-201ENST00000584683 2140 ntBASIC5.29□□□□□ -1.56
H3F3AP84243 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.29□□□□□ -1.56
H3F3AP84243 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
H3F3AP84243 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
H3F3AP84243 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
H3F3AP84243 RNA5SP273-201ENST00000362484 113 ntBASIC5.29□□□□□ -1.56
H3F3AP84243 RNA5SP477-201ENST00000362639 119 ntBASIC5.29□□□□□ -1.56
H3F3AP84243 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.29□□□□□ -1.56
H3F3AP84243 GNG5P2-201ENST00000372054 207 ntBASIC5.29□□□□□ -1.56
H3F3AP84243 NPM1P37-201ENST00000403105 874 ntBASIC5.29□□□□□ -1.56
H3F3AP84243 AL354890.1-201ENST00000413730 346 ntBASIC5.29□□□□□ -1.56
H3F3AP84243 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.29□□□□□ -1.56
H3F3AP84243 RPS14P4-201ENST00000415880 418 ntBASIC5.29□□□□□ -1.56
H3F3AP84243 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.29□□□□□ -1.56
H3F3AP84243 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
H3F3AP84243 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.29□□□□□ -1.56
H3F3AP84243 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.29□□□□□ -1.56
H3F3AP84243 AL663074.2-201ENST00000440621 479 ntBASIC5.29□□□□□ -1.56
H3F3AP84243 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
H3F3AP84243 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.29□□□□□ -1.56
H3F3AP84243 OR52E7P-201ENST00000452394 933 ntBASIC5.29□□□□□ -1.56
H3F3AP84243 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.29□□□□□ -1.56
H3F3AP84243 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.29□□□□□ -1.56
H3F3AP84243 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
H3F3AP84243 snoU13.29-201ENST00000459370 104 ntBASIC5.29□□□□□ -1.56
H3F3AP84243 AL122020.1-201ENST00000472287 459 ntBASIC5.29□□□□□ -1.56
H3F3AP84243 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.29□□□□□ -1.56
H3F3AP84243 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.29□□□□□ -1.56
H3F3AP84243 RPL38P3-201ENST00000484463 213 ntBASIC5.29□□□□□ -1.56
H3F3AP84243 TRBV5-2-201ENST00000489095 273 ntBASIC5.29□□□□□ -1.56
H3F3AP84243 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.29□□□□□ -1.56
H3F3AP84243 AP000648.1-201ENST00000529682 397 ntBASIC5.29□□□□□ -1.56
H3F3AP84243 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.29□□□□□ -1.56
H3F3AP84243 AC091078.2-201ENST00000557145 559 ntBASIC5.29□□□□□ -1.56
H3F3AP84243 AC007346.2-201ENST00000564816 892 ntBASIC5.29□□□□□ -1.56
H3F3AP84243 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.29□□□□□ -1.56
H3F3AP84243 MIR4776-2-201ENST00000580204 80 ntBASIC5.29□□□□□ -1.56
H3F3AP84243 AL031601.1-201ENST00000605702 394 ntBASIC5.29□□□□□ -1.56
H3F3AP84243 AC108865.2-201ENST00000606881 432 ntBASIC5.29□□□□□ -1.56
H3F3AP84243 AL021918.2-201ENST00000613415 194 ntBASIC5.29□□□□□ -1.56
H3F3AP84243 AC129778.1-202ENST00000623812 261 ntBASIC5.29□□□□□ -1.56
H3F3AP84243 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.29□□□□□ -1.56
H3F3AP84243 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.29□□□□□ -1.56
H3F3AP84243 AL591379.1-207ENST00000635982 261 ntBASIC5.29□□□□□ -1.56
H3F3AP84243 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.29□□□□□ -1.56
H3F3AP84243 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.29□□□□□ -1.56
H3F3AP84243 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
H3F3AP84243 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
H3F3AP84243 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
H3F3AP84243 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.29□□□□□ -1.56
H3F3AP84243 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
H3F3AP84243 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
H3F3AP84243 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
H3F3AP84243 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
H3F3AP84243 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
H3F3AP84243 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
H3F3AP84243 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
H3F3AP84243 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
H3F3AP84243 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
H3F3AP84243 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.28□□□□□ -1.56
H3F3AP84243 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
H3F3AP84243 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.28□□□□□ -1.56
H3F3AP84243 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
H3F3AP84243 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
H3F3AP84243 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
H3F3AP84243 SUGT1P2-201ENST00000379452 992 ntBASIC5.28□□□□□ -1.56
H3F3AP84243 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.28□□□□□ -1.56
H3F3AP84243 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
H3F3AP84243 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.28□□□□□ -1.56
H3F3AP84243 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.28□□□□□ -1.56
H3F3AP84243 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.28□□□□□ -1.56
H3F3AP84243 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.28□□□□□ -1.56
H3F3AP84243 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
H3F3AP84243 Y_RNA.667-201ENST00000516212 107 ntBASIC5.28□□□□□ -1.56
H3F3AP84243 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.28□□□□□ -1.56
H3F3AP84243 WBP1LP3-201ENST00000523033 208 ntBASIC5.28□□□□□ -1.56
H3F3AP84243 TRIM77BP-201ENST00000524985 1119 ntBASIC5.28□□□□□ -1.56
H3F3AP84243 AC005363.1-201ENST00000530779 351 ntBASIC5.28□□□□□ -1.56
H3F3AP84243 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.28□□□□□ -1.56
H3F3AP84243 AL356801.1-201ENST00000559320 294 ntBASIC5.28□□□□□ -1.56
H3F3AP84243 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
H3F3AP84243 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
H3F3AP84243 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.28□□□□□ -1.56
H3F3AP84243 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
H3F3AP84243 AL583832.1-201ENST00000603227 784 ntBASIC5.28□□□□□ -1.56
H3F3AP84243 AC093388.1-201ENST00000609166 430 ntBASIC5.28□□□□□ -1.56
H3F3AP84243 AC025262.3-201ENST00000623666 360 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms