Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.86□□□□□ -1.47
RAE1P78406 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.86□□□□□ -1.47
RAE1P78406 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RAE1P78406 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
RAE1P78406 RNU1-59P-201ENST00000364829 162 ntBASIC5.86□□□□□ -1.47
RAE1P78406 PRELID1P1-201ENST00000403549 660 ntBASIC5.86□□□□□ -1.47
RAE1P78406 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.86□□□□□ -1.47
RAE1P78406 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.86□□□□□ -1.47
RAE1P78406 RPL12P49-201ENST00000441100 121 ntBASIC5.86□□□□□ -1.47
RAE1P78406 AL512593.1-201ENST00000444758 779 ntBASIC5.86□□□□□ -1.47
RAE1P78406 AC099670.1-201ENST00000455141 783 ntBASIC5.86□□□□□ -1.47
RAE1P78406 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.86□□□□□ -1.47
RAE1P78406 GTF2IP9-201ENST00000502460 301 ntBASIC5.86□□□□□ -1.47
RAE1P78406 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RAE1P78406 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
RAE1P78406 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.86□□□□□ -1.47
RAE1P78406 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.86□□□□□ -1.47
RAE1P78406 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.86□□□□□ -1.47
RAE1P78406 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.86□□□□□ -1.47
RAE1P78406 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.86□□□□□ -1.47
RAE1P78406 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.86□□□□□ -1.47
RAE1P78406 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.86□□□□□ -1.47
RAE1P78406 AC036111.2-201ENST00000533247 901 ntBASIC5.86□□□□□ -1.47
RAE1P78406 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.86□□□□□ -1.47
RAE1P78406 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.86□□□□□ -1.47
RAE1P78406 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.86□□□□□ -1.47
RAE1P78406 AC005632.2-201ENST00000564271 828 ntBASIC5.86□□□□□ -1.47
RAE1P78406 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.86□□□□□ -1.47
RAE1P78406 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.86□□□□□ -1.47
RAE1P78406 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.86□□□□□ -1.47
RAE1P78406 PRELID3BP3-201ENST00000584963 545 ntBASIC5.86□□□□□ -1.47
RAE1P78406 AC011891.2-201ENST00000604949 397 ntBASIC5.86□□□□□ -1.47
RAE1P78406 AC141002.1-201ENST00000607025 279 ntBASIC5.86□□□□□ -1.47
RAE1P78406 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RAE1P78406 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RAE1P78406 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.86□□□□□ -1.47
RAE1P78406 RN7SL261P-201ENST00000613441 282 ntBASIC5.86□□□□□ -1.47
RAE1P78406 AC004477.3-201ENST00000614061 590 ntBASIC5.86□□□□□ -1.47
RAE1P78406 U1.25-201ENST00000614085 162 ntBASIC5.86□□□□□ -1.47
RAE1P78406 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RAE1P78406 U1.34-201ENST00000618578 162 ntBASIC5.86□□□□□ -1.47
RAE1P78406 U1.31-201ENST00000620022 160 ntBASIC5.86□□□□□ -1.47
RAE1P78406 AC097520.1-201ENST00000624435 385 ntBASIC5.86□□□□□ -1.47
RAE1P78406 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.86□□□□□ -1.47
RAE1P78406 TMEM30CP-203ENST00000637814 1035 ntBASIC5.86□□□□□ -1.47
RAE1P78406 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.86□□□□□ -1.47
RAE1P78406 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.86□□□□□ -1.47
RAE1P78406 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
RAE1P78406 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RAE1P78406 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RAE1P78406 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RAE1P78406 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RAE1P78406 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.86□□□□□ -1.47
RAE1P78406 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RAE1P78406 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.85□□□□□ -1.47
RAE1P78406 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
RAE1P78406 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
RAE1P78406 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RAE1P78406 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.85□□□□□ -1.47
RAE1P78406 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RAE1P78406 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RAE1P78406 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RAE1P78406 IMMTP1-201ENST00000435590 2219 ntBASIC5.85□□□□□ -1.47
RAE1P78406 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
RAE1P78406 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
RAE1P78406 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.85□□□□□ -1.47
RAE1P78406 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.85□□□□□ -1.47
RAE1P78406 PTCD2P2-201ENST00000415579 1095 ntBASIC5.85□□□□□ -1.47
RAE1P78406 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.85□□□□□ -1.47
RAE1P78406 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.85□□□□□ -1.47
RAE1P78406 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.85□□□□□ -1.47
RAE1P78406 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.85□□□□□ -1.47
RAE1P78406 LINC00328-2P-201ENST00000436585 219 ntBASIC5.85□□□□□ -1.47
RAE1P78406 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.85□□□□□ -1.47
RAE1P78406 RPS18P1-201ENST00000447840 458 ntBASIC5.85□□□□□ -1.47
RAE1P78406 BUD31P2-201ENST00000449374 300 ntBASIC5.85□□□□□ -1.47
RAE1P78406 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.85□□□□□ -1.47
RAE1P78406 AC104629.2-201ENST00000468627 598 ntBASIC5.85□□□□□ -1.47
RAE1P78406 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.85□□□□□ -1.47
RAE1P78406 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.85□□□□□ -1.47
RAE1P78406 MTND6P8-201ENST00000503471 522 ntBASIC5.85□□□□□ -1.47
RAE1P78406 NAMPTP2-201ENST00000505629 1115 ntBASIC5.85□□□□□ -1.47
RAE1P78406 MTCO1P31-201ENST00000506355 492 ntBASIC5.85□□□□□ -1.47
RAE1P78406 HMGN1P16-201ENST00000508308 283 ntBASIC5.85□□□□□ -1.47
RAE1P78406 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.85□□□□□ -1.47
RAE1P78406 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.85□□□□□ -1.47
RAE1P78406 MTCO3P27-201ENST00000514397 196 ntBASIC5.85□□□□□ -1.47
RAE1P78406 RNA5SP434-201ENST00000516647 121 ntBASIC5.85□□□□□ -1.47
RAE1P78406 AC067904.2-201ENST00000517322 1283 ntBASIC5.85□□□□□ -1.47
RAE1P78406 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.85□□□□□ -1.47
RAE1P78406 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.85□□□□□ -1.47
RAE1P78406 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.85□□□□□ -1.47
RAE1P78406 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RAE1P78406 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RAE1P78406 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.85□□□□□ -1.47
RAE1P78406 RN7SL339P-201ENST00000580597 296 ntBASIC5.85□□□□□ -1.47
RAE1P78406 AC005242.1-201ENST00000585658 438 ntBASIC5.85□□□□□ -1.47
RAE1P78406 MIR132-201ENST00000591554 101 ntBASIC5.85□□□□□ -1.47
RAE1P78406 AC073333.2-201ENST00000603589 769 ntBASIC5.85□□□□□ -1.47
RAE1P78406 WBP1LP12-201ENST00000604449 331 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 154.8 ms