Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
RPL39P62891 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4□□□□□ -1.77
RPL39P62891 ATP5A1P1-201ENST00000454088 1321 ntBASIC4□□□□□ -1.77
RPL39P62891 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC4□□□□□ -1.77
RPL39P62891 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RPL39P62891 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4□□□□□ -1.77
RPL39P62891 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4□□□□□ -1.77
RPL39P62891 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC4□□□□□ -1.77
RPL39P62891 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4□□□□□ -1.77
RPL39P62891 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RPL39P62891 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RPL39P62891 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4□□□□□ -1.77
RPL39P62891 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RPL39P62891 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RPL39P62891 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4□□□□□ -1.77
RPL39P62891 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4□□□□□ -1.77
RPL39P62891 RNA5SP110-201ENST00000362638 115 ntBASIC4□□□□□ -1.77
RPL39P62891 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC4□□□□□ -1.77
RPL39P62891 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4□□□□□ -1.77
RPL39P62891 PRELID1P1-201ENST00000403549 660 ntBASIC4□□□□□ -1.77
RPL39P62891 AL358178.1-201ENST00000407698 397 ntBASIC4□□□□□ -1.77
RPL39P62891 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC4□□□□□ -1.77
RPL39P62891 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4□□□□□ -1.77
RPL39P62891 AC130360.1-201ENST00000425489 1117 ntBASIC4□□□□□ -1.77
RPL39P62891 AL136231.1-201ENST00000429407 730 ntBASIC4□□□□□ -1.77
RPL39P62891 AL445466.1-201ENST00000448432 357 ntBASIC4□□□□□ -1.77
RPL39P62891 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC4□□□□□ -1.77
RPL39P62891 TFP1-201ENST00000460564 572 ntTSL 4 BASIC4□□□□□ -1.77
RPL39P62891 RPS7P10-201ENST00000464254 603 ntBASIC4□□□□□ -1.77
RPL39P62891 AC023245.1-201ENST00000468501 517 ntBASIC4□□□□□ -1.77
RPL39P62891 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RPL39P62891 TFP1-203ENST00000490470 561 ntTSL 4 BASIC4□□□□□ -1.77
RPL39P62891 AC117500.1-201ENST00000497352 755 ntBASIC4□□□□□ -1.77
RPL39P62891 AC073648.3-201ENST00000504939 925 ntBASIC4□□□□□ -1.77
RPL39P62891 MRPL57P6-201ENST00000506570 309 ntBASIC4□□□□□ -1.77
RPL39P62891 MAST4-IT1-201ENST00000514241 658 ntBASIC4□□□□□ -1.77
RPL39P62891 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4□□□□□ -1.77
RPL39P62891 AC130365.2-201ENST00000525882 1201 ntBASIC4□□□□□ -1.77
RPL39P62891 AC036111.2-201ENST00000533247 901 ntBASIC4□□□□□ -1.77
RPL39P62891 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4□□□□□ -1.77
RPL39P62891 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC4□□□□□ -1.77
RPL39P62891 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC4□□□□□ -1.77
RPL39P62891 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
RPL39P62891 AC027796.1-201ENST00000575593 512 ntBASIC4□□□□□ -1.77
RPL39P62891 AC073333.2-201ENST00000603589 769 ntBASIC4□□□□□ -1.77
RPL39P62891 AC099777.1-201ENST00000603779 1070 ntBASIC4□□□□□ -1.77
RPL39P62891 AC092944.2-201ENST00000605443 889 ntBASIC4□□□□□ -1.77
RPL39P62891 AL139124.1-201ENST00000609123 421 ntBASIC4□□□□□ -1.77
RPL39P62891 AL139099.4-201ENST00000614802 114 ntBASIC4□□□□□ -1.77
RPL39P62891 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC4□□□□□ -1.77
RPL39P62891 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4□□□□□ -1.77
RPL39P62891 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC4□□□□□ -1.77
RPL39P62891 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4□□□□□ -1.77
RPL39P62891 AC073488.3-201ENST00000631611 778 ntBASIC4□□□□□ -1.77
RPL39P62891 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4□□□□□ -1.77
RPL39P62891 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RPL39P62891 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC4□□□□□ -1.77
RPL39P62891 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
RPL39P62891 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RPL39P62891 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4□□□□□ -1.77
RPL39P62891 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4□□□□□ -1.77
RPL39P62891 AC079097.1-201ENST00000512187 1399 ntBASIC4□□□□□ -1.77
RPL39P62891 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC4□□□□□ -1.77
RPL39P62891 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4□□□□□ -1.77
RPL39P62891 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4□□□□□ -1.77
RPL39P62891 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC4□□□□□ -1.77
RPL39P62891 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
RPL39P62891 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RPL39P62891 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RPL39P62891 LARS-201ENST00000274562 2213 ntTSL 2 BASIC3.99□□□□□ -1.77
RPL39P62891 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RPL39P62891 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RPL39P62891 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC3.99□□□□□ -1.77
RPL39P62891 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RPL39P62891 RBPJP7-201ENST00000442803 1447 ntBASIC3.99□□□□□ -1.77
RPL39P62891 RBPJP5-201ENST00000449433 1447 ntBASIC3.99□□□□□ -1.77
RPL39P62891 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
RPL39P62891 Z95331.1-201ENST00000623075 23112 ntBASIC3.99□□□□□ -1.77
RPL39P62891 SELENOWP1-201ENST00000322792 252 ntBASIC3.99□□□□□ -1.77
RPL39P62891 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RPL39P62891 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RPL39P62891 MIR130A-201ENST00000385274 89 ntBASIC3.99□□□□□ -1.77
RPL39P62891 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
RPL39P62891 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RPL39P62891 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RPL39P62891 AL139805.1-201ENST00000407837 289 ntBASIC3.99□□□□□ -1.77
RPL39P62891 THEM7P-201ENST00000419556 672 ntBASIC3.99□□□□□ -1.77
RPL39P62891 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC3.99□□□□□ -1.77
RPL39P62891 DEFA9P-201ENST00000433042 285 ntBASIC3.99□□□□□ -1.77
RPL39P62891 NDUFB4P8-201ENST00000435351 367 ntBASIC3.99□□□□□ -1.77
RPL39P62891 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
RPL39P62891 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC3.99□□□□□ -1.77
RPL39P62891 TAAR4P-201ENST00000454843 1039 ntBASIC3.99□□□□□ -1.77
RPL39P62891 AC063955.1-201ENST00000462872 685 ntBASIC3.99□□□□□ -1.77
RPL39P62891 RPS23P2-201ENST00000463671 415 ntBASIC3.99□□□□□ -1.77
RPL39P62891 AP003385.3-201ENST00000472498 287 ntBASIC3.99□□□□□ -1.77
RPL39P62891 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC3.99□□□□□ -1.77
RPL39P62891 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC3.99□□□□□ -1.77
RPL39P62891 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC3.99□□□□□ -1.77
RPL39P62891 SEPT10P1-201ENST00000517342 1162 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms