Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLRN1P58418 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CLRN1P58418 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLRN1P58418 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLRN1P58418 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CLRN1P58418 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CLRN1P58418 SNORA38B-201ENST00000363524 131 ntBASIC5.93□□□□□ -1.46
CLRN1P58418 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.93□□□□□ -1.46
CLRN1P58418 SNORD116-12-201ENST00000384468 92 ntBASIC5.93□□□□□ -1.46
CLRN1P58418 AL359694.1-201ENST00000403247 604 ntBASIC5.93□□□□□ -1.46
CLRN1P58418 AL356968.2-201ENST00000412769 1257 ntBASIC5.93□□□□□ -1.46
CLRN1P58418 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC5.93□□□□□ -1.46
CLRN1P58418 RPS3AP37-201ENST00000419176 745 ntBASIC5.93□□□□□ -1.46
CLRN1P58418 AL513175.2-201ENST00000422071 443 ntBASIC5.93□□□□□ -1.46
CLRN1P58418 NAP1L4P2-201ENST00000425958 899 ntBASIC5.93□□□□□ -1.46
CLRN1P58418 AC009303.1-201ENST00000426307 352 ntBASIC5.93□□□□□ -1.46
CLRN1P58418 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.93□□□□□ -1.46
CLRN1P58418 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.93□□□□□ -1.46
CLRN1P58418 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
CLRN1P58418 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.93□□□□□ -1.46
CLRN1P58418 AC069540.1-201ENST00000446320 988 ntBASIC5.93□□□□□ -1.46
CLRN1P58418 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC5.93□□□□□ -1.46
CLRN1P58418 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.93□□□□□ -1.46
CLRN1P58418 RPL7P45-201ENST00000455851 743 ntBASIC5.93□□□□□ -1.46
CLRN1P58418 AC004890.1-201ENST00000461005 181 ntBASIC5.93□□□□□ -1.46
CLRN1P58418 AC023245.1-201ENST00000468501 517 ntBASIC5.93□□□□□ -1.46
CLRN1P58418 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.93□□□□□ -1.46
CLRN1P58418 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.93□□□□□ -1.46
CLRN1P58418 SNORA58-201ENST00000505219 137 ntBASIC5.93□□□□□ -1.46
CLRN1P58418 AC095052.1-201ENST00000509955 863 ntBASIC5.93□□□□□ -1.46
CLRN1P58418 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5.93□□□□□ -1.46
CLRN1P58418 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLRN1P58418 MTND4LP31-201ENST00000514859 294 ntBASIC5.93□□□□□ -1.46
CLRN1P58418 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.93□□□□□ -1.46
CLRN1P58418 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.93□□□□□ -1.46
CLRN1P58418 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.93□□□□□ -1.46
CLRN1P58418 OR8I1P-201ENST00000529291 931 ntBASIC5.93□□□□□ -1.46
CLRN1P58418 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC5.93□□□□□ -1.46
CLRN1P58418 AC087897.1-201ENST00000550134 156 ntBASIC5.93□□□□□ -1.46
CLRN1P58418 NDUFA5P11-201ENST00000567995 343 ntBASIC5.93□□□□□ -1.46
CLRN1P58418 ANP32BP1-202ENST00000568553 737 ntBASIC5.93□□□□□ -1.46
CLRN1P58418 AC106785.4-201ENST00000569492 412 ntBASIC5.93□□□□□ -1.46
CLRN1P58418 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.93□□□□□ -1.46
CLRN1P58418 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.93□□□□□ -1.46
CLRN1P58418 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
CLRN1P58418 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLRN1P58418 MTCO2P22-201ENST00000603246 681 ntBASIC5.93□□□□□ -1.46
CLRN1P58418 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC5.93□□□□□ -1.46
CLRN1P58418 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.93□□□□□ -1.46
CLRN1P58418 AL390318.1-201ENST00000624564 687 ntBASIC5.93□□□□□ -1.46
CLRN1P58418 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.93□□□□□ -1.46
CLRN1P58418 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC5.93□□□□□ -1.46
CLRN1P58418 OR7A1P-202ENST00000641542 1158 ntBASIC5.93□□□□□ -1.46
CLRN1P58418 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLRN1P58418 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.93□□□□□ -1.46
CLRN1P58418 ZNF876P-202ENST00000398732 1485 ntBASIC5.93□□□□□ -1.46
CLRN1P58418 SLC2A3P4-201ENST00000521259 1471 ntBASIC5.93□□□□□ -1.46
CLRN1P58418 AL132640.2-201ENST00000559968 1698 ntBASIC5.93□□□□□ -1.46
CLRN1P58418 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLRN1P58418 TNPO1P2-201ENST00000426249 2665 ntBASIC5.93□□□□□ -1.46
CLRN1P58418 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.93□□□□□ -1.46
CLRN1P58418 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
CLRN1P58418 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLRN1P58418 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLRN1P58418 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.93□□□□□ -1.46
CLRN1P58418 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC5.93□□□□□ -1.46
CLRN1P58418 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC5.93□□□□□ -1.46
CLRN1P58418 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLRN1P58418 AL445523.1-201ENST00000451184 1362 ntBASIC5.93□□□□□ -1.46
CLRN1P58418 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLRN1P58418 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.93□□□□□ -1.46
CLRN1P58418 AL137058.3-201ENST00000624531 3099 ntBASIC5.93□□□□□ -1.46
CLRN1P58418 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CLRN1P58418 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.92□□□□□ -1.46
CLRN1P58418 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC5.92□□□□□ -1.46
CLRN1P58418 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.92□□□□□ -1.46
CLRN1P58418 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.92□□□□□ -1.46
CLRN1P58418 AP002370.1-201ENST00000528055 1602 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 PABPC1P8-201ENST00000452851 2086 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.92□□□□□ -1.46
CLRN1P58418 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLRN1P58418 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.92□□□□□ -1.46
CLRN1P58418 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLRN1P58418 CASC19-228ENST00000641414 1684 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLRN1P58418 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLRN1P58418 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CLRN1P58418 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CLRN1P58418 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLRN1P58418 OR11H13P-201ENST00000359695 979 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 RNA5SP333-201ENST00000363466 118 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 RNA5SP512-201ENST00000364550 120 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 RNA5SP334-201ENST00000364825 118 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 RNA5SP355-201ENST00000365317 135 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC5.92□□□□□ -1.46
CLRN1P58418 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CLRN1P58418 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLRN1P58418 RNU1-46P-201ENST00000384425 164 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 MIR27A-201ENST00000385073 78 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 AL445238.1-204ENST00000400311 463 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms