Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLDN6P56747 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
CLDN6P56747 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.75□□□□□ -1.49
CLDN6P56747 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.75□□□□□ -1.49
CLDN6P56747 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLDN6P56747 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC5.75□□□□□ -1.49
CLDN6P56747 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLDN6P56747 RNA5SP46-201ENST00000362370 120 ntBASIC5.75□□□□□ -1.49
CLDN6P56747 SNORA70-201ENST00000384436 135 ntBASIC5.75□□□□□ -1.49
CLDN6P56747 RN7SKP216-201ENST00000411050 312 ntBASIC5.75□□□□□ -1.49
CLDN6P56747 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.75□□□□□ -1.49
CLDN6P56747 RPS15AP30-201ENST00000420976 390 ntBASIC5.75□□□□□ -1.49
CLDN6P56747 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.75□□□□□ -1.49
CLDN6P56747 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.75□□□□□ -1.49
CLDN6P56747 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.75□□□□□ -1.49
CLDN6P56747 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.75□□□□□ -1.49
CLDN6P56747 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.75□□□□□ -1.49
CLDN6P56747 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.75□□□□□ -1.49
CLDN6P56747 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.75□□□□□ -1.49
CLDN6P56747 AC024940.4-201ENST00000605507 246 ntBASIC5.75□□□□□ -1.49
CLDN6P56747 AC007204.2-201ENST00000615022 616 ntBASIC5.75□□□□□ -1.49
CLDN6P56747 AC087565.3-203ENST00000641018 837 ntBASIC5.75□□□□□ -1.49
CLDN6P56747 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLDN6P56747 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.75□□□□□ -1.49
CLDN6P56747 PDZK1P1-202ENST00000425209 1350 ntBASIC5.75□□□□□ -1.49
CLDN6P56747 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLDN6P56747 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.75□□□□□ -1.49
CLDN6P56747 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.75□□□□□ -1.49
CLDN6P56747 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.75□□□□□ -1.49
CLDN6P56747 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.75□□□□□ -1.49
CLDN6P56747 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CLDN6P56747 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.74□□□□□ -1.49
CLDN6P56747 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CLDN6P56747 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN6P56747 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN6P56747 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN6P56747 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN6P56747 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.74□□□□□ -1.49
CLDN6P56747 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN6P56747 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN6P56747 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN6P56747 OR10R3P-201ENST00000361688 942 ntBASIC5.74□□□□□ -1.49
CLDN6P56747 AL050335.1-201ENST00000396909 869 ntBASIC5.74□□□□□ -1.49
CLDN6P56747 Y_RNA.625-201ENST00000411256 107 ntBASIC5.74□□□□□ -1.49
CLDN6P56747 OR2AT2P-201ENST00000413438 905 ntBASIC5.74□□□□□ -1.49
CLDN6P56747 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN6P56747 KIF4CP-201ENST00000422742 1279 ntBASIC5.74□□□□□ -1.49
CLDN6P56747 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.74□□□□□ -1.49
CLDN6P56747 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.74□□□□□ -1.49
CLDN6P56747 HMGB3P24-201ENST00000433260 622 ntBASIC5.74□□□□□ -1.49
CLDN6P56747 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.74□□□□□ -1.49
CLDN6P56747 AL390119.1-201ENST00000440329 312 ntBASIC5.74□□□□□ -1.49
CLDN6P56747 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.74□□□□□ -1.49
CLDN6P56747 MGAT2P1-201ENST00000449718 797 ntBASIC5.74□□□□□ -1.49
CLDN6P56747 OTX2P1-201ENST00000450956 354 ntBASIC5.74□□□□□ -1.49
CLDN6P56747 AC008629.2-201ENST00000503783 483 ntBASIC5.74□□□□□ -1.49
CLDN6P56747 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.74□□□□□ -1.49
CLDN6P56747 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.74□□□□□ -1.49
CLDN6P56747 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.74□□□□□ -1.49
CLDN6P56747 MIR6748-201ENST00000610433 71 ntBASIC5.74□□□□□ -1.49
CLDN6P56747 AF117829.2-201ENST00000619538 361 ntBASIC5.74□□□□□ -1.49
CLDN6P56747 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CLDN6P56747 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC5.74□□□□□ -1.49
CLDN6P56747 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC5.74□□□□□ -1.49
CLDN6P56747 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.74□□□□□ -1.49
CLDN6P56747 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN6P56747 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.74□□□□□ -1.49
CLDN6P56747 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.74□□□□□ -1.49
CLDN6P56747 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN6P56747 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CLDN6P56747 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CLDN6P56747 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.74□□□□□ -1.49
CLDN6P56747 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN6P56747 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
CLDN6P56747 AC105749.1-201ENST00000631338 2008 ntBASIC5.74□□□□□ -1.49
CLDN6P56747 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.74□□□□□ -1.49
CLDN6P56747 AC117409.1-201ENST00000470499 1310 ntBASIC5.74□□□□□ -1.49
CLDN6P56747 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLDN6P56747 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CLDN6P56747 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLDN6P56747 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLDN6P56747 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLDN6P56747 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLDN6P56747 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.73□□□□□ -1.49
CLDN6P56747 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.73□□□□□ -1.49
CLDN6P56747 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.73□□□□□ -1.49
CLDN6P56747 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.73□□□□□ -1.49
CLDN6P56747 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.73□□□□□ -1.49
CLDN6P56747 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.73□□□□□ -1.49
CLDN6P56747 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLDN6P56747 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.73□□□□□ -1.49
CLDN6P56747 AC004815.1-201ENST00000484185 331 ntBASIC5.73□□□□□ -1.49
CLDN6P56747 AC114728.1-201ENST00000488289 483 ntBASIC5.73□□□□□ -1.49
CLDN6P56747 NENFP3-201ENST00000503735 313 ntBASIC5.73□□□□□ -1.49
CLDN6P56747 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.73□□□□□ -1.49
CLDN6P56747 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.73□□□□□ -1.49
CLDN6P56747 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.73□□□□□ -1.49
CLDN6P56747 uc_338.26-201ENST00000612659 160 ntBASIC5.73□□□□□ -1.49
CLDN6P56747 AL359513.1-201ENST00000614364 557 ntBASIC5.73□□□□□ -1.49
CLDN6P56747 TCL6_3.1-201ENST00000619064 137 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms