Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.38□□□□□ -1.39
GFRA1P56159 VN1R82P-201ENST00000601481 356 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 AP001981.2-201ENST00000603241 418 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 CLPTM1LP1-201ENST00000604519 484 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
GFRA1P56159 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 AC008626.2-201ENST00000624425 248 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 MIR4278-201ENST00000636094 69 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.38□□□□□ -1.39
GFRA1P56159 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
GFRA1P56159 AP005901.5-201ENST00000545779 1796 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.38□□□□□ -1.39
GFRA1P56159 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
GFRA1P56159 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC6.38□□□□□ -1.39
GFRA1P56159 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
GFRA1P56159 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
GFRA1P56159 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
GFRA1P56159 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
GFRA1P56159 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
GFRA1P56159 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
GFRA1P56159 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC6.38□□□□□ -1.39
GFRA1P56159 AC011592.1-201ENST00000624647 3634 ntBASIC6.38□□□□□ -1.39
GFRA1P56159 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC6.38□□□□□ -1.39
GFRA1P56159 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC6.38□□□□□ -1.39
GFRA1P56159 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
GFRA1P56159 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC6.37□□□□□ -1.39
GFRA1P56159 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC6.37□□□□□ -1.39
GFRA1P56159 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC6.37□□□□□ -1.39
GFRA1P56159 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.37□□□□□ -1.39
GFRA1P56159 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
GFRA1P56159 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
GFRA1P56159 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
GFRA1P56159 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
GFRA1P56159 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.37□□□□□ -1.39
GFRA1P56159 NSRP1P1-201ENST00000444067 1693 ntBASIC6.37□□□□□ -1.39
GFRA1P56159 AP000776.1-201ENST00000530032 1663 ntBASIC6.37□□□□□ -1.39
GFRA1P56159 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.37□□□□□ -1.39
GFRA1P56159 AP000526.1-201ENST00000603308 1388 ntBASIC6.37□□□□□ -1.39
GFRA1P56159 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
GFRA1P56159 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
GFRA1P56159 RNU6-666P-201ENST00000363499 107 ntBASIC6.37□□□□□ -1.39
GFRA1P56159 RNU6-1017P-201ENST00000363613 106 ntBASIC6.37□□□□□ -1.39
GFRA1P56159 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
GFRA1P56159 RNU6-185P-201ENST00000384421 107 ntBASIC6.37□□□□□ -1.39
GFRA1P56159 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
GFRA1P56159 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
GFRA1P56159 RPS27AP11-201ENST00000402798 447 ntBASIC6.37□□□□□ -1.39
GFRA1P56159 RN7SKP268-201ENST00000411107 316 ntBASIC6.37□□□□□ -1.39
GFRA1P56159 AC017078.1-201ENST00000416146 368 ntBASIC6.37□□□□□ -1.39
GFRA1P56159 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC6.37□□□□□ -1.39
GFRA1P56159 RPL17P17-201ENST00000419491 557 ntBASIC6.37□□□□□ -1.39
GFRA1P56159 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.37□□□□□ -1.39
GFRA1P56159 MTCO1P52-201ENST00000433928 531 ntBASIC6.37□□□□□ -1.39
GFRA1P56159 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC6.37□□□□□ -1.39
GFRA1P56159 FTH1P16-201ENST00000435241 552 ntBASIC6.37□□□□□ -1.39
GFRA1P56159 AL353706.1-201ENST00000436728 494 ntBASIC6.37□□□□□ -1.39
GFRA1P56159 AL604028.2-201ENST00000437848 788 ntBASIC6.37□□□□□ -1.39
GFRA1P56159 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.37□□□□□ -1.39
GFRA1P56159 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
GFRA1P56159 NPM1P23-201ENST00000440193 849 ntBASIC6.37□□□□□ -1.39
GFRA1P56159 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.37□□□□□ -1.39
GFRA1P56159 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC6.37□□□□□ -1.39
GFRA1P56159 AL929288.2-201ENST00000446368 407 ntBASIC6.37□□□□□ -1.39
GFRA1P56159 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.37□□□□□ -1.39
GFRA1P56159 PRDX1P1-201ENST00000449329 596 ntBASIC6.37□□□□□ -1.39
GFRA1P56159 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.37□□□□□ -1.39
GFRA1P56159 RPL21P134-201ENST00000453468 483 ntBASIC6.37□□□□□ -1.39
GFRA1P56159 MEF2AP1-201ENST00000454867 863 ntBASIC6.37□□□□□ -1.39
GFRA1P56159 AC019084.1-201ENST00000457337 432 ntBASIC6.37□□□□□ -1.39
GFRA1P56159 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC6.37□□□□□ -1.39
GFRA1P56159 RPL30P6-201ENST00000475925 342 ntBASIC6.37□□□□□ -1.39
GFRA1P56159 RN7SL849P-201ENST00000485236 295 ntBASIC6.37□□□□□ -1.39
GFRA1P56159 PFN2-217ENST00000498307 556 ntTSL 4 BASIC6.37□□□□□ -1.39
GFRA1P56159 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC6.37□□□□□ -1.39
GFRA1P56159 AC010625.1-201ENST00000511296 403 ntBASIC6.37□□□□□ -1.39
GFRA1P56159 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.37□□□□□ -1.39
GFRA1P56159 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC6.37□□□□□ -1.39
GFRA1P56159 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.37□□□□□ -1.39
GFRA1P56159 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC6.37□□□□□ -1.39
GFRA1P56159 RN7SKP11-201ENST00000517018 287 ntBASIC6.37□□□□□ -1.39
GFRA1P56159 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
GFRA1P56159 UBE2NP1-201ENST00000545592 458 ntBASIC6.37□□□□□ -1.39
GFRA1P56159 AL121766.1-201ENST00000547436 487 ntBASIC6.37□□□□□ -1.39
GFRA1P56159 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
GFRA1P56159 AC008126.1-201ENST00000549019 480 ntBASIC6.37□□□□□ -1.39
GFRA1P56159 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC6.37□□□□□ -1.39
GFRA1P56159 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC6.37□□□□□ -1.39
GFRA1P56159 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC6.37□□□□□ -1.39
GFRA1P56159 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.37□□□□□ -1.39
GFRA1P56159 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC6.37□□□□□ -1.39
GFRA1P56159 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC6.37□□□□□ -1.39
GFRA1P56159 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC6.37□□□□□ -1.39
GFRA1P56159 ISCA1P3-201ENST00000577104 373 ntBASIC6.37□□□□□ -1.39
GFRA1P56159 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC6.37□□□□□ -1.39
GFRA1P56159 MIR3915-201ENST00000578518 97 ntBASIC6.37□□□□□ -1.39
GFRA1P56159 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.37□□□□□ -1.39
GFRA1P56159 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC6.37□□□□□ -1.39
GFRA1P56159 MIR4999-201ENST00000585029 91 ntBASIC6.37□□□□□ -1.39
GFRA1P56159 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.37□□□□□ -1.39
GFRA1P56159 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms